Basic Information
Locus ID:
COCNU_01G021170
Species & Taxonomic ID:
Cocos nucifera & 13894
Genome Assembly:
GCA_008124465.1
Description:
Serine threonine-protein kinase-like protein CCR4
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1 | 113976535 | 113978472 | - | COCNU_01G021170 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.39 | 69,714.50 Da | 44.10 | 83.78 | -0.12 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 351 | 626 | 2.18364E-97 | - |
| Pfam | PF00069 | Protein kinase domain | 346 | 574 | 2.2E-44 | IPR000719 |
| Pfam | PF13540 | Regulator of chromosome condensation (RCC1) repeat | 132 | 155 | 1.7E-5 | - |
| Pfam | PF13540 | Regulator of chromosome condensation (RCC1) repeat | 98 | 119 | 1.4E-7 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 324 | 625 | 1.16E-73 | IPR011009 |
| SUPERFAMILY | SSF50985 | RCC1/BLIP-II | 20 | 202 | 9.55E-21 | IPR009091 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 324 | 429 | 1.7E-29 | - |
| Gene3D | G3DSA:2.130.10.30 | - | 14 | 239 | 9.9E-24 | IPR009091 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 430 | 639 | 9.7E-52 | - |
| SMART | SM00220 | serkin_6 | 345 | 599 | 4.1E-31 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 345 | 628 | 38.039555 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 475 | 487 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 351 | 373 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G47850.1 | CRINKLY4 related 4. | 0 |
| RefSeq | XP_010911856.1 | serine/threonine-protein kinase-like protein CCR4 [Elaeis guineensis] | 0 |
| Q9FIJ6 | Serine/threonine-protein kinase-like protein CCR4 OS=Arabidopsis thaliana OX=3702 GN=CCR4 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8K0MW01 | Serine/threonine-protein kinase-like protein CCR4 OS=Cocos nucifera OX=13894 GN=COCNU_01G021170 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology