Basic Information
Locus ID:
COCNU_01G020000
Species & Taxonomic ID:
Cocos nucifera & 13894
Genome Assembly:
GCA_008124465.1
Description:
Phosphatidylinositol-4-phosphate 5-Kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1 | 110086292 | 110096148 | + | COCNU_01G020000 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.68 | 185,413.73 Da | 42.66 | 81.29 | -0.36 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd03334 | Fab1_TCP | 241 | 477 | 1.48092E-93 | - |
| CDD | cd17300 | PIPKc_PIKfyve | 1371 | 1630 | 3.02867E-138 | IPR044769 |
| Pfam | PF00118 | TCP-1/cpn60 chaperonin family | 258 | 424 | 1.2E-17 | IPR002423 |
| Pfam | PF01504 | Phosphatidylinositol-4-phosphate 5-Kinase | 1411 | 1574 | 2.4E-34 | IPR002498 |
| SUPERFAMILY | SSF56104 | SAICAR synthase-like | 1367 | 1631 | 1.18E-78 | - |
| SUPERFAMILY | SSF52029 | GroEL apical domain-like | 302 | 430 | 7.06E-23 | IPR027409 |
| Gene3D | G3DSA:3.50.7.10 | GroEL | 301 | 442 | 5.6E-29 | IPR027409 |
| Gene3D | G3DSA:3.30.800.10 | Phosphatidylinositol Phosphate Kinase II Beta | 1348 | 1489 | 1.6E-35 | IPR027484 |
| Gene3D | G3DSA:3.30.810.10 | - | 1493 | 1631 | 1.4E-41 | - |
| SMART | SM00330 | PIPK_2 | 1344 | 1631 | 1.2E-88 | IPR002498 |
| ProSiteProfiles | PS51455 | Phosphatidylinositol phosphate kinase (PIPK) domain profile. | 1315 | 1630 | 56.772484 | IPR002498 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 200 | 220 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G14270.1 | phosphatidylinositol-4-phosphate 5-kinase family protein. Encodes a protein that is predicted to act as a 1-phosphatidylinositol-3-phosphate (PtdIns3P) 5-kinase based on its homology to Fab1 from yeast. It contains an FYVE domain required for binding to PtdIns3P-containing membranes in yeast, as well as a Cpn60_TCP1 homology domain plus a kinase domain. fab1a/fab1b pollen grains not viable and have defective vacuolar organization. | 0 |
| RefSeq | XP_010910903.1 | 1-phosphatidylinositol-3-phosphate 5-kinase FAB1A [Elaeis guineensis] | 0 |
| Q9LUM0 | 1-phosphatidylinositol-3-phosphate 5-kinase FAB1B OS=Arabidopsis thaliana OX=3702 GN=FAB1B PE=1 SV=1 | 0 | |
| TrEMBL | A0A8K0HX31 | 1-phosphatidylinositol-3-phosphate 5-kinase OS=Cocos nucifera OX=13894 GN=COCNU_01G020000 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology