Basic Information
Locus ID:
COCNU_01G018090
Species & Taxonomic ID:
Cocos nucifera & 13894
Genome Assembly:
GCA_008124465.1
Description:
monogalactosyldiacylglycerol synthase 3, chloroplastic
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1 | 99643336 | 99647436 | + | COCNU_01G018090 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.48 | 53,120.76 Da | 47.30 | 86.34 | -0.20 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd17507 | GT28_Beta-DGS-like | 76 | 452 | 8.28742E-145 | - |
| Pfam | PF04101 | Glycosyltransferase family 28 C-terminal domain | 285 | 401 | 6.2E-9 | IPR007235 |
| Pfam | PF06925 | Monogalactosyldiacylglycerol (MGDG) synthase | 87 | 255 | 9.5E-60 | IPR009695 |
| SUPERFAMILY | SSF53756 | UDP-Glycosyltransferase/glycogen phosphorylase | 76 | 452 | 7.39E-25 | - |
| Gene3D | G3DSA:3.40.50.2000 | Glycogen Phosphorylase B; | 263 | 436 | 1.2E-26 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 31 | 50 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G20410.1 | monogalactosyldiacylglycerol synthase 2. Encodes a type B monogalactosyldiacylglycerol (MGDG) synthase. Strongly induced by phosphate deprivation, and in non-photosynthetic tissues. Does not contribute to galactolipid synthesis under Pi-sufficient conditions but does under Pi starvation. | 0 |
| RefSeq | XP_019702324.1 | probable monogalactosyldiacylglycerol synthase 3, chloroplastic [Elaeis guineensis] | 0 |
| Q0DWQ1 | Probable monogalactosyldiacylglycerol synthase 3, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=MGD3 PE=3 SV=2 | 0 | |
| TrEMBL | A0A8K0HX80 | monogalactosyldiacylglycerol synthase OS=Cocos nucifera OX=13894 GN=COCNU_01G018090 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology