Basic Information
Locus ID:
COCNU_01G016960
Species & Taxonomic ID:
Cocos nucifera & 13894
Genome Assembly:
GCA_008124465.1
Description:
Leucine rich repeat N-terminal domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1 | 88845465 | 88846529 | + | COCNU_01G016960 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.56 | 37,333.65 Da | 42.36 | 102.74 | 0.17 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13855 | Leucine rich repeat | 57 | 116 | 6.1E-7 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 172 | 229 | 9.1E-7 | IPR001611 |
| SUPERFAMILY | SSF52058 | L domain-like | 44 | 325 | 2.38E-43 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 2 | 148 | 1.2E-32 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 149 | 326 | 7.3E-29 | IPR032675 |
| PRINTS | PR00019 | Leucine-rich repeat signature | 195 | 208 | 4.2E-6 | - |
| PRINTS | PR00019 | Leucine-rich repeat signature | 106 | 119 | 4.2E-6 | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G03440.1 | Leucine-rich repeat (LRR) family protein. | 0 |
| RefSeq | XP_010904840.2 | LRR receptor-like serine/threonine-protein kinase ERL1 [Elaeis guineensis] | 0 |
| TrEMBL | A0A8K0MVC6 | LRR receptor-like serine/threonine-protein kinase ERL1 OS=Cocos nucifera OX=13894 GN=COCNU_01G016960 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology