Basic Information
Locus ID:
COCNU_01G016110
Species & Taxonomic ID:
Cocos nucifera & 13894
Genome Assembly:
GCA_008124465.1
Description:
Endoplasmic reticulum vesicle transporter
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1 | 66849693 | 66853677 | - | COCNU_01G016110 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.19 | 25,543.41 Da | 31.68 | 66.26 | -0.63 |
Protein Domain:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G36050.2 | Endoplasmic reticulum vesicle transporter protein. | 0 |
| RefSeq | XP_010908611.1 | endoplasmic reticulum-Golgi intermediate compartment protein 3 [Elaeis guineensis] | 0 |
| Q6NVS2 | Endoplasmic reticulum-Golgi intermediate compartment protein 3 OS=Xenopus tropicalis OX=8364 GN=ergic3 PE=2 SV=1 | 0 | |
| TrEMBL | A0A8K0HVY7 | Putative endoplasmic reticulum-Golgi intermediate compartment protein 3 (Fragment) OS=Cocos nucifera OX=13894 GN=COCNU_01G016110 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Arecaceae | Cocos nucifera | 1 | COCNU_01G016110 |
| Asparagaceae | Asparagus officinalis | 6 | AsparagusV1_05.1942.V1.1, AsparagusV1_05.680.V1.1 ... |
| Brassicaceae | Brassica nigra | 1 | BniB01g044620.2N |
| Poaceae | Sporobolus alterniflorus | 1 | Chr20G008700 |