Basic Information
Locus ID:
COCNU_01G016040
Species & Taxonomic ID:
Cocos nucifera & 13894
Genome Assembly:
GCA_008124465.1
Description:
Translocase of chloroplast 159/132, membrane anchor domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1 | 65588203 | 65592739 | + | COCNU_01G016040 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.58 | 152,673.81 Da | 47.27 | 81.70 | -0.46 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd01853 | Toc34_like | 752 | 1000 | 2.2013E-127 | - |
| Pfam | PF04548 | AIG1 family | 783 | 917 | 2.1E-26 | IPR006703 |
| Pfam | PF11886 | Translocase of chloroplast 159/132, membrane anchor domain | 1145 | 1409 | 8.6E-126 | IPR024283 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 776 | 942 | 3.43E-21 | IPR027417 |
| Gene3D | G3DSA:3.40.50.300 | - | 756 | 1002 | 4.3E-60 | IPR027417 |
| TIGRFAM | TIGR00993 | 3a0901s04IAP86: chloroplast protein import component Toc86/159, G and M domains | 663 | 1416 | 0.0 | IPR005690 |
| ProSiteProfiles | PS51720 | AIG1-type G domain profile. | 780 | 1009 | 30.385015 | IPR006703 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 22 | 74 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 414 | 492 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 580 | 598 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 535 | 562 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 357 | 379 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 47 | 63 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 416 | 444 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 575 | 623 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 319 | 383 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Cellular Component:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G02510.1 | translocon at the outer envelope membrane of chloroplasts 159. An integral membrane GTPase that functions as a transit-sequence receptor required for the import of proteins necessary for chloroplast biogenesis. Located in the outer chloroplast membrane. Phosphorylation of the G-domains regulate translocon assembly. | 0 |
| RefSeq | XP_010910150.1 | translocase of chloroplast 159, chloroplastic [Elaeis guineensis] | 0 |
| O81283 | Translocase of chloroplast 159, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=TOC159 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8K0MVQ5 | Translocase of chloroplast, chloroplastic OS=Cocos nucifera OX=13894 GN=COCNU_01G016040 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology