halophFGD

Basic Information

Locus ID: COCNU_01G015420

Species & Taxonomic ID: Cocos nucifera & 13894

Genome Assembly: GCA_008124465.1

Description: RING-like zinc finger

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
chr1	54231028	54237123	-	COCNU_01G015420

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
4.57	36,486.46 Da	57.41	73.28	-0.48

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
MobiDBLite	mobidb-lite	consensus disorder prediction	239	274	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	223	296	-	-

KEGG Pathway

KO Term:

K22378 (E3 ubiquitin-protein ligase RNF181 [EC:2.3.2.27])

Best hit

Source	Best Hit ID	Description	E-value
RefSeq	XP_038975401.1	E3 ubiquitin-protein ligase Praja-1-like [Phoenix dactylifera]	0
TrEMBL	A0A8K0HWJ9	Uncharacterized protein OS=Cocos nucifera OX=13894 GN=COCNU_01G015420 PE=4 SV=1	0

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

Orthology

Family	Species	Count	Orthologous Genes
Arecaceae	Cocos nucifera	2	COCNU_01G015400, COCNU_01G015420
Arecaceae	Phoenix dactylifera	2	gene-LOC108511340, gene-LOC120106529