Basic Information
Locus ID:
COCNU_01G015330
Species & Taxonomic ID:
Cocos nucifera & 13894
Genome Assembly:
GCA_008124465.1
Short Name:
CPK24
Description:
Calcium-dependent protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1 | 53370320 | 53375969 | + | COCNU_01G015330 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.24 | 59,210.49 Da | 43.36 | 81.30 | -0.39 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd05117 | STKc_CAMK | 75 | 310 | 3.25085E-119 | - |
| CDD | cd00051 | EFh | 357 | 414 | 2.68796E-17 | IPR002048 |
| CDD | cd00051 | EFh | 428 | 490 | 6.03643E-18 | IPR002048 |
| Pfam | PF13499 | EF-hand domain pair | 426 | 489 | 5.7E-12 | IPR002048 |
| Pfam | PF13499 | EF-hand domain pair | 357 | 415 | 4.4E-10 | IPR002048 |
| Pfam | PF00069 | Protein kinase domain | 78 | 310 | 1.2E-63 | IPR000719 |
| SUPERFAMILY | SSF47473 | EF-hand | 333 | 502 | 3.0E-43 | IPR011992 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 72 | 310 | 2.02E-72 | IPR011009 |
| Gene3D | G3DSA:1.10.238.10 | - | 327 | 489 | 2.6E-51 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 78 | 161 | 1.1E-27 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 162 | 325 | 2.4E-45 | - |
| Gene3D | G3DSA:1.10.238.10 | - | 350 | 418 | 2.6E-51 | - |
| SMART | SM00054 | efh_1 | 428 | 456 | 1.5E-4 | IPR002048 |
| SMART | SM00054 | efh_1 | 392 | 420 | 0.3 | IPR002048 |
| SMART | SM00220 | serkin_6 | 76 | 361 | 3.2E-75 | IPR000719 |
| SMART | SM00054 | efh_1 | 464 | 492 | 5.4E-4 | IPR002048 |
| SMART | SM00054 | efh_1 | 356 | 384 | 4.2E-4 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 424 | 459 | 14.792358 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 352 | 387 | 14.931837 | IPR002048 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 76 | 355 | 42.124279 | IPR000719 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 388 | 423 | 9.241175 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 460 | 495 | 13.927603 | IPR002048 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 82 | 105 | - | IPR017441 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 401 | 413 | - | IPR018247 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 196 | 208 | - | IPR008271 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 365 | 377 | - | IPR018247 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 473 | 485 | - | IPR018247 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 437 | 449 | - | IPR018247 |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G19450.1 | calcium-dependent protein kinase 19. calcium-dependent protein kinase (CDPK19) mRNA, complete | 0 |
| RefSeq | XP_010912114.1 | calcium-dependent protein kinase 8 [Elaeis guineensis] | 0 |
| Q2QVG8 | Calcium-dependent protein kinase 29 OS=Oryza sativa subsp. japonica OX=39947 GN=CPK29 PE=2 SV=1 | 0 | |
| TrEMBL | A0A8K0HW27 | Calcium-dependent protein kinase 8 OS=Cocos nucifera OX=13894 GN=COCNU_01G015330 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology