Basic Information
Locus ID:
COCNU_01G013740
Species & Taxonomic ID:
Cocos nucifera & 13894
Genome Assembly:
GCA_008124465.1
Description:
Legume lectin domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1 | 41943829 | 41945744 | - | COCNU_01G013740 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.66 | 58,355.51 Da | 41.50 | 80.72 | -0.18 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd06899 | lectin_legume_LecRK_Arcelin_ConA | 29 | 259 | 1.29014E-81 | IPR001220 |
| Pfam | PF00139 | Legume lectin domain | 29 | 258 | 2.1E-55 | IPR001220 |
| Pfam | PF00069 | Protein kinase domain | 357 | 506 | 8.1E-35 | IPR000719 |
| SUPERFAMILY | SSF49899 | Concanavalin A-like lectins/glucanases | 28 | 261 | 9.33E-58 | IPR013320 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 339 | 509 | 1.62E-52 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 433 | 528 | 5.1E-25 | - |
| Gene3D | G3DSA:2.60.120.200 | - | 26 | 267 | 6.2E-62 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 319 | 432 | 1.5E-28 | - |
| SMART | SM00220 | serkin_6 | 357 | 528 | 2.2E-9 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 357 | 528 | 29.149267 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 363 | 386 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 477 | 489 | - | IPR008271 |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G55830.1 | Concanavalin A-like lectin protein kinase family protein. | 0 |
| RefSeq | XP_010943363.1 | probable L-type lectin-domain containing receptor kinase S.7 [Elaeis guineensis] | 0 |
| Q9FHG4 | Probable L-type lectin-domain containing receptor kinase S.7 OS=Arabidopsis thaliana OX=3702 GN=LECRKS7 PE=2 SV=1 | 0 | |
| TrEMBL | A0A8K0HWE3 | Protein kinase domain OS=Cocos nucifera OX=13894 GN=COCNU_01G013740 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology