Basic Information
Locus ID:
COCNU_01G010680
Species & Taxonomic ID:
Cocos nucifera & 13894
Genome Assembly:
GCA_008124465.1
Description:
Ubiquitin system component Cue protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1 | 29350586 | 29366569 | + | COCNU_01G010680 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.96 | 49,435.68 Da | 41.37 | 81.40 | -0.35 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14279 | CUE | 77 | 110 | 3.55306E-10 | - |
| Pfam | PF00141 | Peroxidase | 275 | 421 | 4.0E-38 | IPR002016 |
| Pfam | PF02845 | CUE domain | 76 | 110 | 7.9E-8 | IPR003892 |
| SUPERFAMILY | SSF48113 | Heme-dependent peroxidases | 274 | 458 | 5.3E-55 | IPR010255 |
| SUPERFAMILY | SSF46934 | UBA-like | 76 | 121 | 4.15E-8 | IPR009060 |
| Gene3D | G3DSA:1.10.420.10 | Peroxidase, domain 2 | 302 | 437 | 3.9E-56 | - |
| Gene3D | G3DSA:1.10.520.10 | - | 274 | 458 | 3.9E-56 | - |
| Gene3D | G3DSA:1.10.8.10 | - | 69 | 118 | 1.4E-6 | - |
| ProSiteProfiles | PS50873 | Plant heme peroxidase family profile. | 197 | 458 | 39.229195 | IPR002016 |
| ProSiteProfiles | PS51140 | CUE domain profile. | 72 | 115 | 12.96983 | IPR003892 |
| ProSitePatterns | PS00435 | Peroxidases proximal heme-ligand signature. | 324 | 334 | - | IPR019793 |
| PRINTS | PR00461 | Plant peroxidase signature | 323 | 335 | 7.4E-30 | IPR000823 |
| PRINTS | PR00461 | Plant peroxidase signature | 276 | 291 | 7.4E-30 | IPR000823 |
| PRINTS | PR00461 | Plant peroxidase signature | 432 | 445 | 7.4E-30 | IPR000823 |
| PRINTS | PR00458 | Haem peroxidase superfamily signature | 276 | 288 | 2.4E-17 | IPR002016 |
| PRINTS | PR00461 | Plant peroxidase signature | 391 | 408 | 7.4E-30 | IPR000823 |
| PRINTS | PR00461 | Plant peroxidase signature | 375 | 390 | 7.4E-30 | IPR000823 |
| PRINTS | PR00458 | Haem peroxidase superfamily signature | 324 | 339 | 2.4E-17 | IPR002016 |
| PRINTS | PR00458 | Haem peroxidase superfamily signature | 377 | 392 | 2.4E-17 | IPR002016 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 31 | 57 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 24 | 58 | - | - |
| Coils | Coil | Coil | 249 | 276 | - | - |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G16270.1 | Peroxidase superfamily protein. | 0 |
| RefSeq | XP_010913329.1 | uncharacterized protein LOC105039050 [Elaeis guineensis] | 0 |
| O23474 | Peroxidase 40 OS=Arabidopsis thaliana OX=3702 GN=PER40 PE=2 SV=2 | 0 | |
| TrEMBL | A0A8K0HV88 | Peroxidase OS=Cocos nucifera OX=13894 GN=COCNU_01G010680 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology