Basic Information
Locus ID:
COCNU_01G007740
Species & Taxonomic ID:
Cocos nucifera & 13894
Genome Assembly:
GCA_008124465.1
Description:
Thioredoxin-like
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1 | 20403184 | 20413130 | + | COCNU_01G007740 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.91 | 116,713.16 Da | 48.57 | 80.07 | -0.45 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd03009 | TryX_like_TryX_NRX | 147 | 277 | 1.15689E-61 | - |
| Pfam | PF13905 | Thioredoxin-like | 4 | 96 | 1.7E-23 | IPR012336 |
| Pfam | PF13905 | Thioredoxin-like | 164 | 258 | 2.2E-27 | IPR012336 |
| Pfam | PF00069 | Protein kinase domain | 699 | 954 | 2.6E-41 | IPR000719 |
| SUPERFAMILY | SSF52833 | Thioredoxin-like | 4 | 98 | 4.59E-13 | IPR036249 |
| SUPERFAMILY | SSF52833 | Thioredoxin-like | 149 | 260 | 3.15E-23 | IPR036249 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 682 | 958 | 9.7E-68 | IPR011009 |
| Gene3D | G3DSA:3.40.30.10 | Glutaredoxin | 143 | 279 | 6.5E-39 | - |
| Gene3D | G3DSA:3.40.30.10 | Glutaredoxin | 3 | 117 | 2.2E-25 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 772 | 983 | 1.1E-47 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 677 | 771 | 8.1E-25 | - |
| SMART | SM00220 | serkin_6 | 699 | 959 | 3.0E-28 | IPR000719 |
| ProSiteProfiles | PS51352 | Thioredoxin domain profile. | 139 | 294 | 10.463327 | IPR013766 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 699 | 962 | 34.915939 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 817 | 829 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 550 | 598 | - | - |
| Coils | Coil | Coil | 551 | 645 | - | - |
| Coils | Coil | Coil | 520 | 540 | - | - |
| Coils | Coil | Coil | 179 | 199 | - | - |
| Coils | Coil | Coil | 650 | 677 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G24370.1 | Protein kinase protein with adenine nucleotide alpha hydrolases-like domain. | 0 |
| RefSeq | XP_010913853.1 | U-box domain-containing protein 35 [Elaeis guineensis] | 0 |
| Q7XPE8 | Probable nucleoredoxin 3 OS=Oryza sativa subsp. japonica OX=39947 GN=Os04g0608600 PE=3 SV=2 | 0 | |
| TrEMBL | A0A8K0HVC0 | Putative U-box domain-containing protein 35 OS=Cocos nucifera OX=13894 GN=COCNU_01G007740 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology