Basic Information
Locus ID:
COCNU_01G007730
Species & Taxonomic ID:
Cocos nucifera & 13894
Genome Assembly:
GCA_008124465.1
Short Name:
PRK1
Description:
LRR receptor-like serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1 | 20396784 | 20400921 | + | COCNU_01G007730 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.04 | 72,119.29 Da | 38.62 | 93.15 | -0.18 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 29 | 74 | 1.6E-7 | IPR013210 |
| Pfam | PF13855 | Leucine rich repeat | 124 | 185 | 1.3E-9 | IPR001611 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 350 | 549 | 3.8E-28 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 350 | 617 | 1.15E-51 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 29 | 233 | 3.74E-29 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 311 | 421 | 1.7E-19 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 146 | 241 | 1.6E-21 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 422 | 642 | 2.7E-39 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 30 | 145 | 5.9E-21 | IPR032675 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 346 | 619 | 26.22353 | IPR000719 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 289 | 321 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 633 | 654 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 620 | 654 | - | - |
| Coils | Coil | Coil | 609 | 629 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G35390.1 | Leucine-rich repeat protein kinase family protein. Encodes a member of the receptor-like kinase family of genes. In pollen tubes, it accumulates in the plasma membrane of the apical growing tip through the process of exocytosis. | 0 |
| RefSeq | XP_010913795.1 | pollen receptor-like kinase 1 [Elaeis guineensis] | 0 |
| C0LGU0 | Pollen receptor-like kinase 1 OS=Arabidopsis thaliana OX=3702 GN=PRK1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8K0HVD8 | Pollen receptor-like kinase 1 OS=Cocos nucifera OX=13894 GN=COCNU_01G007730 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology