Basic Information
Locus ID:
COCNU_01G006260
Species & Taxonomic ID:
Cocos nucifera & 13894
Genome Assembly:
GCA_008124465.1
Description:
Legume lectin domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1 | 16322942 | 16324990 | + | COCNU_01G006260 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.73 | 74,938.15 Da | 42.54 | 86.47 | -0.14 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 365 | 635 | 5.02914E-100 | - |
| CDD | cd06899 | lectin_legume_LecRK_Arcelin_ConA | 30 | 261 | 4.81518E-69 | IPR001220 |
| Pfam | PF00069 | Protein kinase domain | 361 | 632 | 4.2E-49 | IPR000719 |
| Pfam | PF00139 | Legume lectin domain | 30 | 259 | 7.2E-59 | IPR001220 |
| SUPERFAMILY | SSF49899 | Concanavalin A-like lectins/glucanases | 30 | 260 | 3.92E-61 | IPR013320 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 336 | 634 | 1.89E-78 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 435 | 646 | 7.6E-61 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 320 | 434 | 1.7E-27 | - |
| Gene3D | G3DSA:2.60.120.200 | - | 28 | 267 | 5.0E-69 | - |
| SMART | SM00220 | serkin_6 | 359 | 642 | 1.6E-33 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 359 | 642 | 37.445927 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 483 | 495 | - | IPR008271 |
| ProSitePatterns | PS00307 | Legume lectins beta-chain signature. | 144 | 150 | - | IPR019825 |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G55830.1 | Concanavalin A-like lectin protein kinase family protein. | 0 |
| RefSeq | XP_010942610.1 | probable L-type lectin-domain containing receptor kinase S.7 [Elaeis guineensis] | 0 |
| Q9FHG4 | Probable L-type lectin-domain containing receptor kinase S.7 OS=Arabidopsis thaliana OX=3702 GN=LECRKS7 PE=2 SV=1 | 0 | |
| TrEMBL | A0A8K0HUE3 | L-type lectin-domain containing receptor kinase VIII.2 OS=Cocos nucifera OX=13894 GN=COCNU_01G006260 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology