Basic Information
Locus ID:
COCNU_01G004630
Species & Taxonomic ID:
Cocos nucifera & 13894
Genome Assembly:
GCA_008124465.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1 | 11734273 | 11761622 | + | COCNU_01G004630 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.83 | 46,821.34 Da | 31.86 | 93.70 | -0.09 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 258 | 357 | 7.5E-6 | IPR001245 |
| Pfam | PF00069 | Protein kinase domain | 27 | 184 | 2.1E-25 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 10 | 187 | 1.66E-37 | IPR011009 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 193 | 405 | 1.66E-21 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 231 | 412 | 1.8E-19 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 13 | 206 | 1.9E-38 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 23 | 284 | 22.407349 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 29 | 52 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G24030.2 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_010905049.1 | probable serine/threonine-protein kinase PIX13 isoform X7 [Elaeis guineensis] | 0 |
| Q84M95 | Probable serine/threonine-protein kinase PBL28 OS=Arabidopsis thaliana OX=3702 GN=PBL28 PE=2 SV=1 | 0 | |
| TrEMBL | A0A8K0MUD8 | Putative serine/threonine-protein kinase PBL28 OS=Cocos nucifera OX=13894 GN=COCNU_01G004630 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Aizoaceae | Mesembryanthemum crystallinum | 5 | gene_18400, gene_18664, gene_24620, gene_3959, gene_683 |
| Apiaceae | Apium graveolens | 1 | Ag3G01124 |
| Arecaceae | Cocos nucifera | 7 | COCNU_01G004170, COCNU_01G004180, COCNU_01G004190 ... |
| Plantaginaceae | Plantago ovata | 2 | Pov_00013102, Pov_00020524 |
| Portulacaceae | Portulaca oleracea | 1 | evm.TU.LG05.1782 |
| Rhizophoraceae | Bruguiera sexangula | 2 | evm.TU.44822.1, evm.TU.45225.1 |
| Rhizophoraceae | Rhizophora apiculata | 2 | nbisL1-mrna-12784, nbisL1-mrna-12785 |
| Rhizophoraceae | Rhizophora mangle | 2 | nbisL1-mrna-16414, nbisL1-mrna-16417 |
| Solanaceae | Solanum chilense | 1 | SOLCI001117600 |
| Solanaceae | Solanum pennellii | 2 | gene-LOC107008469, gene-LOC107014036 |
| Tamaricaceae | Reaumuria soongarica | 2 | STRG.22124_chr09_-, STRG.740_chr01_- |