Basic Information
Locus ID:
COCNU_01G003000
Species & Taxonomic ID:
Cocos nucifera & 13894
Genome Assembly:
GCA_008124465.1
Description:
Ethylene-responsive protein kinase Le-CTR1
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1 | 7175490 | 7199126 | + | COCNU_01G003000 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.27 | 71,699.34 Da | 38.81 | 90.28 | -0.15 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd13999 | STKc_MAP3K-like | 406 | 639 | 1.22152E-114 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 400 | 638 | 1.1E-57 | IPR001245 |
| Pfam | PF14381 | Ethylene-responsive protein kinase Le-CTR1 | 109 | 220 | 1.5E-32 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 376 | 638 | 1.35E-73 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 393 | 477 | 3.1E-36 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 479 | 639 | 3.3E-49 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 400 | 639 | 39.382282 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 406 | 427 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G24480.3 | - | 0 |
| RefSeq | XP_010914323.1 | serine/threonine-protein kinase CTR1 isoform X1 [Elaeis guineensis] | 0 |
| Q05609 | Serine/threonine-protein kinase CTR1 OS=Arabidopsis thaliana OX=3702 GN=CTR1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8K0MTS8 | Protein kinase domain-containing protein OS=Cocos nucifera OX=13894 GN=COCNU_01G003000 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology