Basic Information
Locus ID:
CH09.928
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| CH09 | 17649011 | 17652540 | - | CH09.928 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.60 | 73,120.31 Da | 53.32 | 78.26 | -0.26 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF01657 | Salt stress response/antifungal | 63 | 153 | 7.3E-12 | IPR002902 |
| Pfam | PF00069 | Protein kinase domain | 363 | 631 | 2.6E-51 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 348 | 651 | 1.07E-78 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 322 | 436 | 1.5E-31 | - |
| Gene3D | G3DSA:3.30.430.20 | - | 53 | 155 | 2.9E-11 | IPR038408 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 437 | 647 | 3.0E-56 | - |
| SMART | SM00220 | serkin_6 | 362 | 634 | 1.0E-37 | IPR000719 |
| ProSiteProfiles | PS51473 | Gnk2-homologous domain profile. | 48 | 156 | 15.547432 | IPR002902 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 362 | 648 | 39.467087 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 480 | 492 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 368 | 390 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 256 | 273 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 215 | 247 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 203 | 273 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 161 | 184 | - | - |
| Coils | Coil | Coil | 385 | 412 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G23160.1 | cysteine-rich RLK (RECEPTOR-like protein kinase) 8. Encodes a cysteine-rich receptor-like protein kinase. | 1.02E-78 |
| RefSeq | XP_039820080.1 | proline-rich receptor-like protein kinase PERK9 isoform X2 [Panicum virgatum] | 7.23E-204 |
| O65468 | Cysteine-rich receptor-like protein kinase 8 OS=Arabidopsis thaliana OX=3702 GN=CRK8 PE=3 SV=2 | 8.79E-78 | |
| TrEMBL | A0A811R2N0 | Cysteine-rich receptor-like protein kinase 25 OS=Miscanthus lutarioriparius OX=422564 GN=NCGR_LOCUS47247 PE=4 SV=1 | 1.04E-226 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Echinochloa crus-galli | 4 | AH09.862, BH09.855, BH09.856, CH09.928 |
| Poaceae | Paspalum vaginatum | 1 | gene-BS78_06G073300 |
| Poaceae | Zea mays | 2 | Zm00001eb421250_P001, Zm00001eb421270_P002 |