HalophFGD

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Basic Information
Locus ID: CH09.603
Species & Taxonomic ID: Echinochloa crus-galli & 90397
Genome Assembly: GWHBDNR00000000
Description: Protein of unknown function (DUF1668)
Maps and Mapping Data
Chromosome Start End Strand ID
CH09 12106180 12106851 - CH09.603
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
4.62 24,967.93 Da 57.06 92.65 -0.10
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
Pfam PF07893 Protein of unknown function (DUF1668) 8 159 5.7E-14 IPR012871
Best hit
Source Best Hit ID Description E-value
TrEMBL A0A835FQG4 DUF295 domain-containing protein OS=Digitaria exilis OX=1010633 GN=HU200_006105 PE=4 SV=1 1.93E-95
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network
🔍 Protein-Protein Interaction Network
Orthology
Family Species Count Orthologous Genes
Poaceae Echinochloa crus-galli 24 AH02.3348, AH03.1478, AH03.2495, AH04.205, AH06.2931 ...
AH09.2277, BH03.1182, BH04.211, BH05.142, BH05.153, BH05.154, BH05.345, BH06.59, BH07.422, BH09.2465, CH04.216, CH05.202, CH05.401, CH05.402, CH05.405, CH06.3099, CH09.2605, CH09.2606, CH09.603
Poaceae Eleusine coracana subsp. coracana 16 gene-QOZ80_3AG0208570, gene-QOZ80_3AG0208580 ...
gene-QOZ80_3BG0253680, gene-QOZ80_3BG0253690, gene-QOZ80_5AG0379900, gene-QOZ80_5AG0379990, gene-QOZ80_5BG0426950, gene-QOZ80_5BG0427060, gene-QOZ80_5BG0427500, gene-QOZ80_5BG0427510, gene-QOZ80_6AG0540520, gene-QOZ80_6AG0540610, gene-QOZ80_6AG0540620, gene-QOZ80_6BG0493840, gene-QOZ80_6BG0493850, gene-QOZ80_6BG0494250
Poaceae Lolium multiflorum 2 gene-QYE76_000182, gene-QYE76_000184
Poaceae Oryza coarctata 6 Oco01G007980, Oco01G012320, Oco02G008270, Oco02G012460 ...
Oco04G005760, Oco21G000830
Poaceae Oryza sativa 11 LOC_Os01g05540.1, LOC_Os01g05560.1, LOC_Os02g10450.1 ...
LOC_Os02g10460.1, LOC_Os04g13460.1, LOC_Os10g19230.1, LOC_Os11g04750.1, LOC_Os11g04760.1, LOC_Os12g04530.1, LOC_Os12g04540.1, LOC_Os12g28090.1
Poaceae Puccinellia tenuiflora 3 Pt_Chr0205117, Pt_Chr0206485, Pt_Chr0206765
Poaceae Sporobolus alterniflorus 1 Chr19G011890
Poaceae Thinopyrum elongatum 2 Tel3E01G668700, Tel5E01G820000
Poaceae Triticum dicoccoides 6 gene_TRIDC3BG041200, gene_TRIDC3BG041270 ...
gene_TRIDC3BG067490, gene_TRIDC4AG052080, gene_TRIDC6AG032870, gene_TRIDC6AG032880
Poaceae Triticum aestivum 13 TraesCS1B02G314200.1, TraesCS1D02G303300.1.cds1 ...
TraesCS3B02G274400.1.cds1, TraesCS3B02G457000.1.cds1, TraesCS3D02G416900.1.cds1, TraesCS6A02G212500.1, TraesCS6A02G212600.1, TraesCS6B02G242100.1, TraesCS6B02G242200.1, TraesCS6B02G242300.3.cds1, TraesCS6B02G242400.1, TraesCS6B02G242500.1, TraesCS6B02G431200.1.cds1
Poaceae Zea mays 1 Zm00001eb399700_P001
Poaceae Zoysia japonica 3 nbis-gene-25719, nbis-gene-25738, nbis-gene-25739
Poaceae Zoysia macrostachya 2 Zma_g24675, Zma_g24688
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.