Basic Information
Locus ID:
CH09.53
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| CH09 | 811324 | 826435 | - | CH09.53 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.19 | 117,192.22 Da | 45.90 | 88.66 | -0.15 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 742 | 1008 | 9.49064E-98 | - |
| Pfam | PF00069 | Protein kinase domain | 737 | 1003 | 3.2E-46 | IPR000719 |
| Pfam | PF13855 | Leucine rich repeat | 392 | 451 | 1.4E-8 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 272 | 332 | 3.4E-7 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 153 | 189 | 1.3E-6 | IPR013210 |
| SUPERFAMILY | SSF52058 | L domain-like | 161 | 507 | 1.7E-52 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 722 | 1027 | 3.28E-79 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 706 | 811 | 7.7E-36 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 412 | 523 | 6.8E-14 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 306 | 411 | 3.6E-26 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 812 | 1031 | 4.9E-56 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 152 | 305 | 4.8E-34 | IPR032675 |
| SMART | SM00369 | LRR_typ_2 | 438 | 462 | 0.34 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 413 | 437 | 260.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 247 | 271 | 300.0 | IPR003591 |
| SMART | SM00220 | serkin_6 | 736 | 1008 | 8.0E-40 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 319 | 343 | 17.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 736 | 1008 | 38.44944 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 742 | 764 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 856 | 868 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1019 | 1055 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 55 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 24 | 38 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G06840.1 | Leucine-rich repeat protein kinase family protein. | 5.18E-267 |
| RefSeq | XP_004974947.1 | probable LRR receptor-like serine/threonine-protein kinase At1g06840 [Setaria italica] | 0 |
| C0LGD7 | Probable LRR receptor-like serine/threonine-protein kinase At1g06840 OS=Arabidopsis thaliana OX=3702 GN=At1g06840 PE=1 SV=2 | 4.99E-266 | |
| TrEMBL | A0A2T7CRK1 | Protein kinase domain-containing protein OS=Panicum hallii var. hallii OX=1504633 GN=GQ55_7G007500 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology