Basic Information
Locus ID:
CH09.3187
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| CH09 | 37803815 | 37811437 | - | CH09.3187 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.76 | 97,703.01 Da | 49.34 | 91.39 | -0.21 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd13999 | STKc_MAP3K-like | 299 | 541 | 3.01836E-121 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 293 | 541 | 9.9E-74 | IPR001245 |
| Pfam | PF00069 | Protein kinase domain | 632 | 879 | 2.9E-62 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 633 | 880 | 4.18E-77 | IPR011009 |
| SUPERFAMILY | SSF55021 | ACT-like | 191 | 258 | 1.17E-8 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 293 | 555 | 5.19E-82 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 612 | 881 | 2.4E-76 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 286 | 547 | 3.5E-85 | - |
| SMART | SM00220 | serkin_6 | 293 | 544 | 1.3E-65 | IPR000719 |
| SMART | SM00220 | serkin_6 | 620 | 879 | 1.0E-81 | IPR000719 |
| ProSiteProfiles | PS51671 | ACT domain profile. | 193 | 269 | 13.002308 | IPR002912 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 620 | 879 | 45.219627 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 293 | 544 | 44.597729 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 410 | 422 | - | IPR008271 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 739 | 751 | - | IPR008271 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 469 | 491 | 1.9E-16 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 512 | 534 | 1.9E-16 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 404 | 422 | 1.9E-16 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 367 | 380 | 1.9E-16 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 450 | 460 | 1.9E-16 | IPR001245 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 132 | 146 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 121 | 155 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 37 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G17700.1 | ACT-like protein tyrosine kinase family protein. | 3.78E-144 |
| RefSeq | XP_034588524.1 | serine/threonine-protein kinase STY8-like isoform X1 [Setaria viridis] | 0 |
| O22558 | Serine/threonine-protein kinase STY8 OS=Arabidopsis thaliana OX=3702 GN=STY8 PE=1 SV=2 | 3.64E-143 | |
| TrEMBL | A0A4U6VHV0 | Serine/threonine-protein kinase STY8 OS=Setaria viridis OX=4556 GN=SEVIR_3G007700v2 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Acanthaceae | Avicennia marina | 1 | jg39629 |
| Aizoaceae | Mesembryanthemum crystallinum | 1 | gene_25223 |
| Amaranthaceae | Beta vulgaris | 1 | BVRB_6g133110 |
| Amaranthaceae | Chenopodium album | 4 | gene:ENSEOMG00000001038, gene:ENSEOMG00000002760 ... |
| Amaranthaceae | Chenopodium quinoa | 2 | CQ.Regalona.r1.6AG0022460, CQ.Regalona.r1.6BG0023690 |
| Anacardiaceae | Pistacia vera | 1 | pistato.v30200640 |
| Arecaceae | Cocos nucifera | 1 | COCNU_01G018790 |
| Arecaceae | Phoenix dactylifera | 1 | gene-LOC103704334 |
| Asparagaceae | Asparagus officinalis | 1 | AsparagusV1_04.759.V1.1 |
| Brassicaceae | Arabidopsis thaliana | 1 | AT1G49180.1 |
| Brassicaceae | Eutrema salsugineum | 1 | Thhalv10011721m.g.v1.0 |
| Brassicaceae | Schrenkiella parvula | 1 | Sp1g36070.v2.2 |
| Brassicaceae | Brassica nigra | 1 | BniB07g006750.2N |
| Casuarinaceae | Casuarina equisetifolia | 1 | Ceq06G1905 |
| Casuarinaceae | Casuarina glauca | 1 | Cgl06G1998 |
| Nitrariaceae | Nitraria sibirica | 1 | evm.TU.LG02.837 |
| Plantaginaceae | Plantago ovata | 1 | Pov_00020514 |
| Poaceae | Echinochloa crus-galli | 2 | AH09.2785, CH09.3187 |
| Poaceae | Eleusine coracana subsp. coracana | 2 | gene-QOZ80_4AG0298640, gene-QOZ80_4BG0329340 |
| Poaceae | Hordeum vulgare | 1 | HORVU.MOREX.r3.2HG0214800.1 |
| Poaceae | Lolium multiflorum | 1 | gene-QYE76_064731 |
| Poaceae | Oryza sativa | 1 | LOC_Os04g58990.1 |
| Poaceae | Paspalum vaginatum | 1 | gene-BS78_06G292100 |
| Poaceae | Puccinellia tenuiflora | 2 | Pt_Chr0306968, Pt_Chr0306976 |
| Poaceae | Thinopyrum elongatum | 1 | Tel2E01G995600 |
| Poaceae | Triticum aestivum | 3 | TraesCS2A02G577400.1, TraesCS2B02G610000.1 ... |
| Poaceae | Zea mays | 1 | Zm00001eb434280_P002 |
| Poaceae | Zoysia japonica | 1 | nbis-gene-6251 |
| Poaceae | Zoysia macrostachya | 1 | Zma_g22276 |
| Portulacaceae | Portulaca oleracea | 2 | evm.TU.LG03.2446, evm.TU.LG17.1492 |
| Rhizophoraceae | Carallia pectinifolia | 1 | nbisL1-mrna-17611 |
| Rhizophoraceae | Ceriops tagal | 1 | nbisL1-mrna-7499 |
| Salicaceae | Populus euphratica | 1 | populus_peu19596 |
| Solanaceae | Lycium barbarum | 1 | gene-LOC132613645 |
| Solanaceae | Solanum chilense | 1 | SOLCI003688400 |
| Solanaceae | Solanum pennellii | 1 | gene-LOC107004922 |