Basic Information
Locus ID:
CH09.3169
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
source UniProtKB
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| CH09 | 37686672 | 37693692 | - | CH09.3169 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.05 | 119,309.24 Da | 53.00 | 66.83 | -0.52 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF56219 | DNase I-like | 961 | 1069 | 6.08E-12 | IPR036691 |
| Gene3D | G3DSA:3.60.10.10 | Endonuclease/exonuclease/phosphatase | 967 | 1076 | 2.1E-8 | IPR036691 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 836 | 853 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 313 | 335 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 937 | 978 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 944 | 967 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 40 | 73 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 457 | 479 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 103 | 226 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 166 | 202 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 831 | 853 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_025876008.1 | uncharacterized protein LOC112936380 [Oryza sativa Japonica Group] | 6.84E-23 |
| TrEMBL | A0A835KRG9 | Retrotransposon protein, putative, unclassified OS=Digitaria exilis OX=1010633 GN=HU200_008706 PE=4 SV=1 | 5.13E-55 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Echinochloa crus-galli | 53 | AH01.2876, AH01.32, AH02.628, AH03.1625, AH03.1818, AH06.974 ... |
| Poaceae | Lolium multiflorum | 1 | gene-QYE76_046977 |
| Poaceae | Oryza coarctata | 1 | Oco17G000100 |
| Poaceae | Paspalum vaginatum | 8 | gene-BS78_01G253900, gene-BS78_02G100600, gene-BS78_K215400 ... |
| Poaceae | Puccinellia tenuiflora | 2 | Pt_Chr0302147, Pt_Chr0601454 |
| Poaceae | Sporobolus alterniflorus | 11 | Chr01G023520, Chr01G024930, Chr05G016830, Chr05G025730 ... |
| Poaceae | Zoysia macrostachya | 1 | Zma_g5044 |