Basic Information
Locus ID:
CH09.2979
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
belongs to the protein kinase superfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| CH09 | 36397762 | 36399171 | + | CH09.2979 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.10 | 48,220.71 Da | 49.99 | 79.64 | -0.23 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 95 | 388 | 5.3E-41 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 76 | 389 | 6.29E-72 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 170 | 394 | 5.2E-53 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 68 | 169 | 1.4E-26 | - |
| SMART | SM00220 | serkin_6 | 93 | 388 | 1.3E-23 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 93 | 402 | 35.608505 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 99 | 121 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 232 | 244 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 410 | 430 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 410 | 438 | - | - |
| Coils | Coil | Coil | 36 | 56 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G32300.1 | S-domain-2 5. | 2.89E-75 |
| RefSeq | XP_004960129.1 | G-type lectin S-receptor-like serine/threonine-protein kinase SD2-5 isoform X1 [Setaria italica] | 5.12E-223 |
| Q8RWZ5 | G-type lectin S-receptor-like serine/threonine-protein kinase SD2-5 OS=Arabidopsis thaliana OX=3702 GN=SD25 PE=1 SV=1 | 2.83E-74 | |
| TrEMBL | K3Z656 | Protein kinase domain-containing protein OS=Setaria italica OX=4555 GN=101755912 PE=3 SV=1 | 1.16E-221 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology