Basic Information
Locus ID:
CH09.2971
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Belongs to the Ca(2 ) cation antiporter (CaCA) (TC 2.A.19) family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| CH09 | 36330839 | 36336261 | + | CH09.2971 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.80 | 59,948.18 Da | 43.01 | 101.27 | 0.33 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF01699 | Sodium/calcium exchanger protein | 400 | 539 | 1.5E-21 | IPR004837 |
| Pfam | PF01699 | Sodium/calcium exchanger protein | 210 | 365 | 2.6E-19 | IPR004837 |
| Gene3D | G3DSA:1.20.1420.30 | - | 386 | 543 | 1.9E-19 | IPR044880 |
| Gene3D | G3DSA:1.20.1420.30 | - | 239 | 378 | 9.2E-15 | IPR044880 |
| TIGRFAM | TIGR00846 | caca2: calcium/proton exchanger | 180 | 542 | 3.3E-118 | - |
| TIGRFAM | TIGR00378 | cax: calcium/proton exchanger | 192 | 542 | 1.3E-105 | IPR004798 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 58 | 78 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Cellular Component:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G13320.1 | cation exchanger 2. low affinity calcium antiporter CAX2 | 3.67E-196 |
| RefSeq | XP_025825684.1 | vacuolar cation/proton exchanger 3 [Panicum hallii] | 8.97E-285 |
| Q6K1C4 | Vacuolar cation/proton exchanger 3 OS=Oryza sativa subsp. japonica OX=39947 GN=CAX3 PE=2 SV=2 | 6.77E-268 | |
| TrEMBL | A0A3L6QAS2 | Vacuolar cation/proton exchanger OS=Panicum miliaceum OX=4540 GN=C2845_PM15G23770 PE=3 SV=1 | 1.01E-283 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology