halophFGD

Basic Information

Locus ID: CH09.2709

Species & Taxonomic ID: Echinochloa crus-galli & 90397

Genome Assembly: GWHBDNR00000000

Description: LRR-repeat protein

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
CH09	34167767	34168730	-	CH09.2709

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
8.97	32,167.95 Da	92.46	50.84	-0.88

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
SUPERFAMILY	SSF81383	F-box domain	20	45	4.97E-5	IPR036047
MobiDBLite	mobidb-lite	consensus disorder prediction	163	188	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	159	278	-	-

Gene Ontology

Molecular Function:

GO:0005515 (protein binding)

Best hit

Source	Best Hit ID	Description	E-value
RefSeq	XP_039840990.1	uncharacterized protein LOC120700838 [Panicum virgatum]	9.32E-58
TrEMBL	A0A1E5VD72	F-box domain-containing protein OS=Dichanthelium oligosanthes OX=888268 GN=BAE44_0015975 PE=4 SV=1	1.32E-60

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

🔍 Protein-Protein Interaction Network

Orthology

Family	Species	Count	Orthologous Genes
Asparagaceae	Asparagus officinalis	2	AsparagusV1_03.840.V1.1, AsparagusV1_03.841.V1.1
Poaceae	Echinochloa crus-galli	16	AH05.2790, AH09.546, AH09.573, AH09.577, BH04.1290, BH09.662 ... BH04.2137, BH04.2144, CH03.599, CH05.2891, CH05.2893, CH09.2376, CH09.2706, CH09.2708, CH09.2709, CH09.665
Poaceae	Eleusine coracana subsp. coracana	9	gene-QOZ80_2AG0114350, gene-QOZ80_4AG0324470 ... gene-QOZ80_5AG0376320, gene-QOZ80_5BG0423540, gene-QOZ80_9AG0690900, gene-QOZ80_9AG0690910, gene-QOZ80_9BG0715310, gene-QOZ80_9BG0717210, gene-QOZ80_9BG0717220
Poaceae	Hordeum vulgare	7	HORVU.MOREX.r3.2HG0106560.1.CDS1 ... HORVU.MOREX.r3.2HG0106730.1.CDS1, HORVU.MOREX.r3.2HG0194620.1.CDS1, HORVU.MOREX.r3.2HG0200500.1.CDS1, HORVU.MOREX.r3.2HG0200520.1.CDS1, HORVU.MOREX.r3.2HG0200660.1.CDS1, HORVU.MOREX.r3.3HG0313980.1.CDS1
Poaceae	Lolium multiflorum	37	gene-QYE76_009133, gene-QYE76_018843, gene-QYE76_019818 ... gene-QYE76_026968, gene-QYE76_028965, gene-QYE76_036425, gene-QYE76_038437, gene-QYE76_038440, gene-QYE76_038449, gene-QYE76_038450, gene-QYE76_038454, gene-QYE76_038459, gene-QYE76_039080, gene-QYE76_039893, gene-QYE76_039896, gene-QYE76_041884, gene-QYE76_047124, gene-QYE76_047126, gene-QYE76_047128, gene-QYE76_047130, gene-QYE76_047133, gene-QYE76_047135, gene-QYE76_047140, gene-QYE76_047142, gene-QYE76_047145, gene-QYE76_047147, gene-QYE76_047150, gene-QYE76_047154, gene-QYE76_047158, gene-QYE76_049310, gene-QYE76_049311, gene-QYE76_057702, gene-QYE76_057707, gene-QYE76_065808, gene-QYE76_065812, gene-QYE76_065819, gene-QYE76_065824
Poaceae	Oryza coarctata	1	Oco08G002160
Poaceae	Oryza sativa	6	LOC_Os04g19810.1, LOC_Os04g19920.1, LOC_Os05g39300.1 ... LOC_Os11g33180.1, LOC_Os11g33210.1, LOC_Os11g42310.1
Poaceae	Paspalum vaginatum	5	gene-BS78_04G092800, gene-BS78_05G225800 ... gene-BS78_05G226000, gene-BS78_09G116200, gene-BS78_09G116400
Poaceae	Puccinellia tenuiflora	8	Pt_Chr0300409, Pt_Chr0300411, Pt_Chr0300412, Pt_Chr0300435 ... Pt_Chr0305575, Pt_Chr0305577, Pt_Chr0404384, Pt_Chr0500148
Poaceae	Sporobolus alterniflorus	4	Chr09G009220, Chr16G004370, Chr16G004500, Chr26G003030
Poaceae	Thinopyrum elongatum	8	Tel1E01G132600, Tel2E01G165600, Tel2E01G790600 ... Tel2E01G829500, Tel2E01G829900, Tel2E01G830400, Tel2E01G830600, Tel3E01G721600
Poaceae	Triticum dicoccoides	13	gene_TRIDC1BG010830, gene_TRIDC2AG008420 ... gene_TRIDC2AG068990, gene_TRIDC2AG069110, gene_TRIDC2BG009780, gene_TRIDC2BG071530, gene_TRIDC2BG074610, gene_TRIDC2BG074700, gene_TRIDC2BG074780, gene_TRIDC2BG074800, gene_TRIDC2BG074810, gene_TRIDC2BG074830, gene_TRIDC2BG074860
Poaceae	Triticum aestivum	27	TraesCS1D02G064800.1, TraesCS2A02G075700.1.cds1 ... TraesCS2A02G075900.1.cds1, TraesCS2A02G468600.1, TraesCS2A02G489200.1.cds1, TraesCS2B02G090500.1.cds1, TraesCS2B02G491500.1, TraesCS2B02G517100.1.cds1, TraesCS2B02G517300.1.cds1, TraesCS2B02G517900.1.cds1, TraesCS2B02G518200.1, TraesCS2D02G074600.1.cds1, TraesCS2D02G489500.1.cds1, TraesCS2D02G489800.1.cds1, TraesCS2D02G490200.1.cds1, TraesCS3A02G455300.1, TraesCS3A02G455400.1, TraesCS3B02G444700.1, TraesCS3B02G445800.1.cds1, TraesCS3B02G494100.1, TraesCS3B02G494400.1.cds1, TraesCS3B02G494900.1.cds1, TraesCS3B02G495000.1.cds1, TraesCS3B02G495100.1.cds1, TraesCS3D02G405600.1.cds1, TraesCS3D02G448200.1.cds1, TraesCS3D02G448300.1.cds1