Basic Information
Locus ID:
CH09.2706
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
LRR-repeat protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| CH09 | 34153856 | 34155646 | + | CH09.2706 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.69 | 64,813.42 Da | 49.63 | 82.43 | -0.28 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF52047 | RNI-like | 260 | 482 | 7.65E-14 | - |
| SUPERFAMILY | SSF81383 | F-box domain | 12 | 50 | 3.66E-8 | IPR036047 |
| Gene3D | G3DSA:1.20.1280.50 | - | 12 | 54 | 2.8E-5 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 258 | 492 | 1.8E-10 | IPR032675 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 211 | 245 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 59 | 87 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G38392.1 | - | 3.46E-6 |
| RefSeq | XP_039840990.1 | uncharacterized protein LOC120700838 [Panicum virgatum] | 1.45E-198 |
| TrEMBL | A0A3L6T0K2 | F-box domain-containing protein OS=Panicum miliaceum OX=4540 GN=C2845_PM05G22890 PE=4 SV=1 | 2.58E-251 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology