Basic Information
Locus ID:
CH09.2627
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
LRR receptor-like serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| CH09 | 32976004 | 32983318 | - | CH09.2627 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.07 | 128,461.42 Da | 38.10 | 87.16 | -0.16 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 839 | 1103 | 6.72495E-96 | - |
| Pfam | PF00069 | Protein kinase domain | 837 | 1098 | 6.6E-49 | IPR000719 |
| Pfam | PF11721 | Malectin domain | 565 | 751 | 3.8E-43 | IPR021720 |
| SUPERFAMILY | SSF52058 | L domain-like | 266 | 526 | 1.68E-51 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 818 | 1120 | 1.35E-81 | IPR011009 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 417 | 562 | 7.8E-20 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 909 | 1118 | 1.0E-57 | - |
| Gene3D | G3DSA:2.60.120.430 | - | 563 | 754 | 6.1E-34 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 807 | 908 | 1.1E-37 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 44 | 416 | 3.6E-49 | IPR032675 |
| SMART | SM00220 | serkin_6 | 833 | 1101 | 6.2E-40 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 833 | 1107 | 39.452953 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 953 | 965 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 839 | 861 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 189 | 215 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1128 | 1160 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1128 | 1153 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G56120.3 | - | 1.34E-237 |
| RefSeq | XP_025826032.1 | probable LRR receptor-like serine/threonine-protein kinase At1g56130 [Panicum hallii] | 0 |
| C0LGH3 | Probable LRR receptor-like serine/threonine-protein kinase At1g56140 OS=Arabidopsis thaliana OX=3702 GN=At1g56140 PE=2 SV=2 | 2.7E-232 | |
| TrEMBL | A0A2T7CZX8 | Protein kinase domain-containing protein OS=Panicum hallii var. hallii OX=1504633 GN=GQ55_7G283300 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology