Basic Information
Locus ID:
CH09.2582
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Ethylene-responsive protein kinase Le-CTR1
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| CH09 | 32705647 | 32710369 | + | CH09.2582 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.93 | 81,680.93 Da | 47.32 | 87.89 | -0.19 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd13999 | STKc_MAP3K-like | 489 | 737 | 6.90409E-127 | - |
| Pfam | PF14381 | Ethylene-responsive protein kinase Le-CTR1 | 134 | 341 | 8.6E-70 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 483 | 737 | 4.2E-64 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 462 | 737 | 1.16E-80 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 562 | 744 | 7.2E-60 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 476 | 560 | 1.6E-35 | - |
| SMART | SM00220 | serkin_6 | 483 | 744 | 2.5E-58 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 483 | 745 | 44.329182 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 489 | 510 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 604 | 616 | - | IPR008271 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 598 | 616 | 3.6E-11 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 645 | 655 | 3.6E-11 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 664 | 686 | 3.6E-11 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 557 | 570 | 3.6E-11 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 708 | 730 | 3.6E-11 | IPR001245 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 23 | 37 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 7 | 22 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 66 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 52 | 66 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G24480.3 | - | 1.47E-255 |
| RefSeq | XP_012702727.2 | serine/threonine-protein kinase CTR1, partial [Setaria italica] | 0 |
| Q05609 | Serine/threonine-protein kinase CTR1 OS=Arabidopsis thaliana OX=3702 GN=CTR1 PE=1 SV=1 | 2.82E-197 | |
| TrEMBL | A0A2T7D028 | Protein kinase domain-containing protein OS=Panicum hallii var. hallii OX=1504633 GN=GQ55_7G279000 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology