halophFGD

Basic Information

Locus ID: CH09.2471

Species & Taxonomic ID: Echinochloa crus-galli & 90397

Genome Assembly: GWHBDNR00000000

Description: POT family

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
CH09	31829891	31840650	+	CH09.2471

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
8.29	145,291.44 Da	49.02	76.97	-0.09

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
Pfam	PF03106	WRKY DNA -binding domain	243	300	1.0E-24	IPR003657
Pfam	PF00854	POT family	910	1337	2.3E-70	IPR000109
SUPERFAMILY	SSF118290	WRKY DNA-binding domain	240	302	1.44E-25	IPR036576
SUPERFAMILY	SSF103473	MFS general substrate transporter	845	1374	1.44E-19	IPR036259
Gene3D	G3DSA:1.20.1250.20	MFS general substrate transporter like domains	825	1378	9.7E-146	IPR036259
Gene3D	G3DSA:2.20.25.80	WRKY domain	215	295	5.3E-30	IPR036576
SMART	SM00774	WRKY_cls	241	301	1.4E-37	IPR003657
ProSiteProfiles	PS50811	WRKY domain profile.	236	302	32.925282	IPR003657
MobiDBLite	mobidb-lite	consensus disorder prediction	309	365	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	794	819	-	-

Gene Ontology

Biological Process:

GO:0006355 (regulation of DNA-templated transcription) GO:0055085 (transmembrane transport)

Molecular Function:

GO:0003700 (DNA-binding transcription factor activity) GO:0022857 (transmembrane transporter activity) GO:0043565 (sequence-specific DNA binding)

Cellular Component:

GO:0016020 (membrane)

KEGG Pathway

KO Term:

K14638 (solute carrier family 15 (peptide/histidine transporter), member 3/4)

Best hit

Source	Best Hit ID	Description	E-value
TAIR	AT1G62200.1	Major facilitator superfamily protein.	3.44E-120
RefSeq	XP_034605456.1	protein NRT1/ PTR FAMILY 8.5-like isoform X1 [Setaria viridis]	7.15E-307
Swiss-Prot	Q93Z20	Protein NRT1/ PTR FAMILY 8.5 OS=Arabidopsis thaliana OX=3702 GN=NPF8.5 PE=2 SV=1	3.32E-119
TrEMBL	A0A4U6TTV7	Peptide transporter OS=Setaria viridis OX=4556 GN=SEVIR_7G233400v2 PE=3 SV=1	8.28E-305

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

🔍 Protein-Protein Interaction Network

Orthology

Family	Species	Count	Orthologous Genes
Acanthaceae	Avicennia marina	3	jg20844, jg22360, jg25065
Aizoaceae	Mesembryanthemum crystallinum	1	gene_22690
Amaranthaceae	Chenopodium album	3	gene:ENSEOMG00000010549, gene:ENSEOMG00000032762 ... gene:ENSEOMG00000045541
Amaranthaceae	Chenopodium quinoa	2	CQ.Regalona.r1.8AG0009680, CQ.Regalona.r1.8BG0010660
Anacardiaceae	Pistacia vera	1	pistato.v30077760
Apiaceae	Apium graveolens	2	Ag1G01465, Ag7G01832
Arecaceae	Cocos nucifera	2	COCNU_07G002900, COCNU_10G002070
Arecaceae	Phoenix dactylifera	2	gene-LOC103699722, gene-LOC103706394
Asparagaceae	Asparagus officinalis	2	AsparagusV1_01.687.V1.1, AsparagusV1_04.907.V1.1
Asteraceae	Flaveria trinervia	1	Ftri15G26134
Brassicaceae	Arabidopsis thaliana	2	AT1G30650.1, AT2G34830.1
Brassicaceae	Eutrema salsugineum	2	Thhalv10007691m.g.v1.0, Thhalv10016714m.g.v1.0
Brassicaceae	Schrenkiella parvula	2	Sp1g26550.v2.2, Sp4g17110.v2.2
Brassicaceae	Brassica nigra	4	BniB01g009450.2N, BniB03g034510.2N, BniB04g046190.2N ... BniB06g009020.2N
Casuarinaceae	Casuarina equisetifolia	1	Ceq04G0615
Casuarinaceae	Casuarina glauca	1	Cgl04G0714
Cymodoceaceae	Cymodocea nodosa	2	gene.Cymno13g02950, gene.Cymno17g03920
Hydrocharitaceae	Thalassia testudinum	1	gene.Thate04g00530
Malvaceae	Hibiscus hamabo Siebold & Zucc.	2	nbisL1-mrna-4855, nbisL1-mrna-652
Nitrariaceae	Nitraria sibirica	1	evm.TU.LG12.1100
Plantaginaceae	Plantago ovata	2	Pov_00012994, Pov_00038582
Poaceae	Echinochloa crus-galli	12	AH01.2754, AH01.621, AH07.3106, AH09.2162, BH01.107 ... BH01.3085, BH07.2929, BH09.2332, CH01.3307, CH07.3006, CH09.2471, CH09.3305
Poaceae	Eleusine coracana subsp. coracana	8	gene-QOZ80_2AG0118570, gene-QOZ80_2AG0141970 ... gene-QOZ80_2BG0172320, gene-QOZ80_2BG0197520, gene-QOZ80_3AG0207750, gene-QOZ80_3BG0252830, gene-QOZ80_4AG0305380, gene-QOZ80_4BG0336400
Poaceae	Hordeum vulgare	4	HORVU.MOREX.r3.1HG0053860.1, HORVU.MOREX.r3.2HG0194370.1 ... HORVU.MOREX.r3.5HG0536370.1, HORVU.MOREX.r3.6HG0606270.1
Poaceae	Lolium multiflorum	4	gene-QYE76_012979, gene-QYE76_024588, gene-QYE76_046049 ... gene-QYE76_059688
Poaceae	Oryza coarctata	7	Oco03G018940, Oco04G019690, Oco05G029300, Oco06G030310 ... Oco07G014740, Oco08G014240, Oco19G011240
Poaceae	Oryza sativa	3	LOC_Os02g47060.1, LOC_Os03g63810.1, LOC_Os04g50920.1
Poaceae	Paspalum vaginatum	4	gene-BS78_01G005400, gene-BS78_01G270900 ... gene-BS78_04G228700, gene-BS78_06G213300
Poaceae	Puccinellia tenuiflora	5	Pt_Chr0203844, Pt_Chr0203864, Pt_Chr0301478, Pt_Chr0301518 ... Pt_Chr0503476
Poaceae	Sporobolus alterniflorus	13	Chr04G032820, Chr06G004470, Chr06G021540, Chr07G032040 ... Chr09G006450, Chr09G022730, Chr13G018270, Chr15G005880, Chr15G017630, Chr23G003360, Chr25G004100, Chr26G014560, Chr30G003970
Poaceae	Thinopyrum elongatum	3	Tel1E01G341400, Tel2E01G753100, Tel6E01G493100
Poaceae	Triticum dicoccoides	7	gene_TRIDC1AG029960, gene_TRIDC1BG035450 ... gene_TRIDC2AG063580, gene_TRIDC2BG067710, gene_TRIDC4AG048540, gene_TRIDC6AG041080, gene_TRIDC6BG048050
Poaceae	Triticum aestivum	12	TraesCS1A02G197400.1, TraesCS1B02G212000.1 ... TraesCS1D02G200900.1, TraesCS2A02G443800.1, TraesCS2B02G465000.1, TraesCS2D02G443000.1, TraesCS4A02G320800.2, TraesCS5B02G558100.2, TraesCS5D02G564500.2, TraesCS6A02G267500.1, TraesCS6B02G294900.1, TraesCS6D02G247200.1
Poaceae	Zea mays	6	Zm00001eb025220_P001, Zm00001eb064880_P002 ... Zm00001eb072020_P001, Zm00001eb188100_P001, Zm00001eb251530_P001, Zm00001eb430130_P001
Poaceae	Zoysia japonica	7	nbis-gene-16782, nbis-gene-22156, nbis-gene-22733 ... nbis-gene-38201, nbis-gene-39340, nbis-gene-5729, nbis-gene-9044
Poaceae	Zoysia macrostachya	7	Zma_g13014, Zma_g14195, Zma_g15779, Zma_g16948, Zma_g20359 ... Zma_g21898, Zma_g2337
Portulacaceae	Portulaca oleracea	2	evm.TU.LG06.852, evm.TU.LG11.7
Posidoniaceae	Posidonia oceanica	1	gene.Posoc10g06030
Rhizophoraceae	Bruguiera sexangula	2	evm.TU.Scaffold_14_RagTag.1025 ... evm.TU.Scaffold_16_RagTag.901
Rhizophoraceae	Carallia pectinifolia	2	nbisL1-mrna-16867, nbisL1-mrna-25076
Rhizophoraceae	Ceriops tagal	3	nbisL1-mrna-4798, nbisL1-mrna-5260, nbisL1-mrna-5889
Rhizophoraceae	Ceriops zippeliana	2	nbisL1-mrna-17314, nbisL1-mrna-19262
Rhizophoraceae	Kandelia candel	2	evm.TU.utg000022l.33, evm.TU.utg000025l.153
Rhizophoraceae	Kandelia obovata	2	Maker00012238, Maker00016033
Rhizophoraceae	Rhizophora apiculata	2	nbisL1-mrna-33, nbisL1-mrna-8605
Rhizophoraceae	Rhizophora mangle	2	nbisL1-mrna-10258, nbisL1-mrna-23019
Salicaceae	Populus euphratica	2	populus_peu00118, populus_peu17182
Solanaceae	Lycium barbarum	1	gene-LOC132631659
Solanaceae	Solanum chilense	1	SOLCI005063400
Solanaceae	Solanum pennellii	1	gene-LOC107010398
Tamaricaceae	Reaumuria soongarica	1	MSTRG.14399_chr08_-
Tamaricaceae	Tamarix chinensis	1	TC06G1190
Zosteraceae	Zostera marina	1	Zosma03g24350.v3.1