Basic Information
Locus ID:
CH09.2313
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Voltage-dependent anion channel
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| CH09 | 30646965 | 30648768 | + | CH09.2313 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 10.05 | 62,708.10 Da | 43.39 | 89.83 | 0.13 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd09323 | TDT_SLAC1_like | 197 | 491 | 1.14178E-101 | - |
| Pfam | PF03595 | Voltage-dependent anion channel | 198 | 502 | 1.4E-45 | IPR004695 |
| Gene3D | G3DSA:1.50.10.150 | - | 194 | 512 | 1.3E-66 | IPR038665 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 534 | 548 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 16 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 529 | 575 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 59 | - | - |
Gene Ontology
Biological Process:
Cellular Component:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G12480.1 | C4-dicarboxylate transporter/malic acid transport protein. Encodes a membrane protein with 10 predicted transmembrane helices. SLAC1 is a multispanning membrane protein expressed predominantly in guard cells that plays a role in regulating cellular ion homeostasis and S-type anion currents. SLAC1 is important for normal stomatal closure in response to a variety of signals including elevated CO2, ozone, ABA, darkness, and humidity. SLAC1:GFP localizes to the plasma membrane. | 3.99E-230 |
| RefSeq | XP_025824262.1 | guard cell S-type anion channel SLAC1 [Panicum hallii] | 0 |
| Q9LD83 | Guard cell S-type anion channel SLAC1 OS=Arabidopsis thaliana OX=3702 GN=SLAC1 PE=1 SV=1 | 3.83E-229 | |
| TrEMBL | A0A1E5V854 | Guard cell S-type anion channel SLAC1 OS=Dichanthelium oligosanthes OX=888268 GN=BAE44_0017678 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology