HalophFGD

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Basic Information
Locus ID: CH09.2217
Species & Taxonomic ID: Echinochloa crus-galli & 90397
Genome Assembly: GWHBDNR00000000
Description: EF-hand domain
Maps and Mapping Data
Chromosome Start End Strand ID
CH09 29745713 29747969 - CH09.2217
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
6.04 59,703.57 Da 42.33 79.19 -0.46
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
CDD cd05117 STKc_CAMK 92 349 1.81577E-135 -
Pfam PF13499 EF-hand domain pair 464 527 7.9E-14 IPR002048
Pfam PF13499 EF-hand domain pair 395 455 1.8E-14 IPR002048
Pfam PF00069 Protein kinase domain 92 350 1.8E-72 IPR000719
SUPERFAMILY SSF47473 EF-hand 386 527 4.61E-47 IPR011992
SUPERFAMILY SSF56112 Protein kinase-like (PK-like) 92 359 2.02E-82 IPR011009
Gene3D G3DSA:1.10.510.10 Transferase(Phosphotransferase) domain 1 178 356 2.3E-57 -
Gene3D G3DSA:1.10.238.10 - 357 529 5.2E-61 -
Gene3D G3DSA:3.30.200.20 Phosphorylase Kinase; domain 1 94 177 6.6E-26 -
SMART SM00220 serkin_6 92 350 8.5E-98 IPR000719
SMART SM00054 efh_1 430 458 6.5E-5 IPR002048
SMART SM00054 efh_1 501 529 1.1E-5 IPR002048
SMART SM00054 efh_1 394 422 2.1E-5 IPR002048
SMART SM00054 efh_1 466 494 7.8E-4 IPR002048
ProSiteProfiles PS50222 EF-hand calcium-binding domain profile. 462 497 15.88028 IPR002048
ProSiteProfiles PS50222 EF-hand calcium-binding domain profile. 498 532 13.425486 IPR002048
ProSiteProfiles PS50222 EF-hand calcium-binding domain profile. 390 425 15.266581 IPR002048
ProSiteProfiles PS50222 EF-hand calcium-binding domain profile. 426 461 12.7281 IPR002048
ProSiteProfiles PS50011 Protein kinase domain profile. 92 350 47.91922 IPR000719
ProSitePatterns PS00107 Protein kinases ATP-binding region signature. 98 121 - IPR017441
ProSitePatterns PS00018 EF-hand calcium-binding domain. 403 415 - IPR018247
ProSitePatterns PS00018 EF-hand calcium-binding domain. 439 451 - IPR018247
ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature. 212 224 - IPR008271
ProSitePatterns PS00018 EF-hand calcium-binding domain. 510 522 - IPR018247
ProSitePatterns PS00018 EF-hand calcium-binding domain. 475 487 - IPR018247
MobiDBLite mobidb-lite consensus disorder prediction 1 59 - -
MobiDBLite mobidb-lite consensus disorder prediction 23 37 - -
Coils Coil Coil 412 432 - -
Gene Ontology
Biological Process:
GO:0006468 (protein phosphorylation)
Molecular Function:
GO:0004672 (protein kinase activity) GO:0005509 (calcium ion binding) GO:0005524 (ATP binding)
KEGG Pathway
KO Term:
K06180 (23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23])
Best hit
Source Best Hit ID Description E-value
TAIR AT1G76040.2 calcium-dependent protein kinase 29. member of Calcium Dependent Protein Kinase 2.91E-205
RefSeq XP_004976490.1 calcium-dependent protein kinase 12 [Setaria italica] 8.49E-300
Swiss-Prot Q7XSQ5 Calcium-dependent protein kinase 12 OS=Oryza sativa subsp. japonica OX=39947 GN=CPK12 PE=2 SV=2 2.6E-251
TrEMBL A0A3L6PZJ4 Calcium-dependent protein kinase 29-like OS=Panicum miliaceum OX=4540 GN=C2845_PM16G16580 PE=4 SV=1 1.01E-298
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network
🔍 Protein-Protein Interaction Network
Orthology
Family Species Count Orthologous Genes
Acanthaceae Avicennia marina 21 jg11725, jg14382, jg15176, jg16355, jg16917, jg19366, jg3681 ...
jg20425, jg21514, jg21886, jg23000, jg23516, jg26104, jg31889, jg31897, jg37691, jg38607, jg39387, jg4759, jg6506, jg8517
Aizoaceae Mesembryanthemum crystallinum 11 gene_100, gene_10179, gene_10344, gene_12265, gene_14694 ...
gene_15273, gene_1547, gene_21794, gene_2331, gene_8423, gene_9788
Amaranthaceae Atriplex hortensis 11 Ah002919, Ah003065, Ah004531, Ah005084, Ah005588, Ah006573 ...
Ah008733, Ah009843, Ah017529, Ah022667, Ah036100
Amaranthaceae Beta vulgaris 9 BVRB_1g001080, BVRB_4g073820, BVRB_4g077520, BVRB_4g088370 ...
BVRB_5g099670, BVRB_5g108920, BVRB_5g109120, BVRB_8g186280, BVRB_9g215750
Amaranthaceae Salicornia bigelovii 22 Sbi_jg11219, Sbi_jg15794, Sbi_jg15820, Sbi_jg17311 ...
Sbi_jg17776, Sbi_jg18146, Sbi_jg23958, Sbi_jg29447, Sbi_jg305, Sbi_jg36207, Sbi_jg36473, Sbi_jg3690, Sbi_jg39982, Sbi_jg40146, Sbi_jg46194, Sbi_jg50065, Sbi_jg55312, Sbi_jg56578, Sbi_jg56618, Sbi_jg61948, Sbi_jg62434, Sbi_jg7790
Amaranthaceae Salicornia europaea 11 Seu_jg1010, Seu_jg12239, Seu_jg13797, Seu_jg13821, Seu_jg569 ...
Seu_jg14353, Seu_jg1713, Seu_jg20521, Seu_jg4315, Seu_jg4493, Seu_jg6284
Amaranthaceae Suaeda aralocaspica 13 GOSA_00000764, GOSA_00001116, GOSA_00001875, GOSA_00005434 ...
GOSA_00006690, GOSA_00006691, GOSA_00007222, GOSA_00011320, GOSA_00012122, GOSA_00014108, GOSA_00015474, GOSA_00022157, GOSA_00029161
Amaranthaceae Suaeda glauca 24 Sgl08738, Sgl10326, Sgl10704, Sgl12139, Sgl15494, Sgl16039 ...
Sgl16060, Sgl17427, Sgl23359, Sgl25358, Sgl28473, Sgl30534, Sgl46313, Sgl51027, Sgl51348, Sgl52606, Sgl52607, Sgl56333, Sgl56595, Sgl57897, Sgl61842, Sgl62129, Sgl66693, Sgl83114
Amaranthaceae Chenopodium album 29 gene:ENSEOMG00000007021, gene:ENSEOMG00000008253 ...
gene:ENSEOMG00000009477, gene:ENSEOMG00000010691, gene:ENSEOMG00000011840, gene:ENSEOMG00000012347, gene:ENSEOMG00000016169, gene:ENSEOMG00000016706, gene:ENSEOMG00000019910, gene:ENSEOMG00000020916, gene:ENSEOMG00000022750, gene:ENSEOMG00000024107, gene:ENSEOMG00000024890, gene:ENSEOMG00000024900, gene:ENSEOMG00000026889, gene:ENSEOMG00000028558, gene:ENSEOMG00000028656, gene:ENSEOMG00000029542, gene:ENSEOMG00000033761, gene:ENSEOMG00000035728, gene:ENSEOMG00000038182, gene:ENSEOMG00000040445, gene:ENSEOMG00000040821, gene:ENSEOMG00000042303, gene:ENSEOMG00000044177, gene:ENSEOMG00000047720, gene:ENSEOMG00000047969, gene:ENSEOMG00000049203, gene:ENSEOMG00000050061
Amaranthaceae Chenopodium quinoa 17 CQ.Regalona.r1.1AG0004350, CQ.Regalona.r1.1AG0021850 ...
CQ.Regalona.r1.1BG0002540, CQ.Regalona.r1.2BG0027870, CQ.Regalona.r1.4AG0006690, CQ.Regalona.r1.4AG0013170, CQ.Regalona.r1.4AG0022590, CQ.Regalona.r1.4BG0002380, CQ.Regalona.r1.4BG0015470, CQ.Regalona.r1.4BG0023850, CQ.Regalona.r1.5AG0006580, CQ.Regalona.r1.5BG0006820, CQ.Regalona.r1.5BG0012200, CQ.Regalona.r1.7BG0004420, CQ.Regalona.r1.8AG0001790, CQ.Regalona.r1.8BG0001700, CQ.Regalona.r1.9AG0020230
Anacardiaceae Pistacia vera 14 pistato.v30036180, pistato.v30048940, pistato.v30050590 ...
pistato.v30069430, pistato.v30108310, pistato.v30135190, pistato.v30156640, pistato.v30158300, pistato.v30169190, pistato.v30202940, pistato.v30276900, pistato.v30277030, pistato.v30277100, pistato.v30286800
Apiaceae Apium graveolens 18 Ag10G00470, Ag10G02901, Ag11G04490, Ag11G05037, Ag1G01019 ...
Ag2G00788, Ag2G01602, Ag3G00683, Ag3G00690, Ag4G01847, Ag4G01925, Ag5G01315, Ag5G02682, Ag6G01692, Ag7G00598, Ag7G02349, Ag9G00969, Ag9G01477
Arecaceae Cocos nucifera 13 COCNU_06G003440, COCNU_06G011870, COCNU_09G005690 ...
COCNU_12G005140, COCNU_14G001940, COCNU_14G007810, COCNU_15G002380, scaffold001753G000020, scaffold003239G000020, scaffold006962G000030, scaffold010979G000020, scaffold017406G000010, scaffold036482G000010
Arecaceae Phoenix dactylifera 17 gene-LOC103695544, gene-LOC103698021, gene-LOC103701286 ...
gene-LOC103704957, gene-LOC103705099, gene-LOC103706309, gene-LOC103709017, gene-LOC103713516, gene-LOC103714529, gene-LOC103716002, gene-LOC103716834, gene-LOC103717626, gene-LOC103717884, gene-LOC103719110, gene-LOC103721833, gene-LOC103723419, gene-LOC120108401
Asparagaceae Asparagus officinalis 16 AsparagusV1_01.1035.V1.1, AsparagusV1_01.1895.V1.1 ...
AsparagusV1_01.3361.V1.1, AsparagusV1_01.391.V1.1, AsparagusV1_02.1983.V1.1, AsparagusV1_02.710.V1.1, AsparagusV1_03.1251.V1.1, AsparagusV1_03.423.V1.1, AsparagusV1_03.429.V1.1, AsparagusV1_04.2188.V1.1, AsparagusV1_05.1643.V1.1, AsparagusV1_05.1660.V1.1, AsparagusV1_07.2340.V1.1, AsparagusV1_09.991.V1.1, AsparagusV1_10.1797.V1.1, AsparagusV1_Unassigned.410.V1.1
Asteraceae Flaveria trinervia 25 Ftri11G27024, Ftri12G31052, Ftri12G33476, Ftri12G33979 ...
Ftri13G32777, Ftri14G04984, Ftri15G31545, Ftri16G16401, Ftri16G21344, Ftri17G10673, Ftri17G29397, Ftri18G07727, Ftri18G12285, Ftri18G13008, Ftri18G24497, Ftri1G21438, Ftri2G04406, Ftri2G30124, Ftri4G09160, Ftri5G03887, Ftri5G20163, Ftri6G10402, Ftri6G17467, Ftri7G08597, Ftri8G19970
Brassicaceae Arabidopsis thaliana 20 AT1G35670.1, AT1G50700.1, AT1G61950.1, AT1G76040.2 ...
AT2G17290.1, AT2G38910.1, AT3G10660.1, AT3G20410.1, AT4G04710.1, AT4G04720.1, AT4G04740.2, AT4G09570.1, AT4G21940.2, AT4G23650.1, AT4G35310.1, AT4G38230.2, AT5G04870.1, AT5G12180.1, AT5G19360.1, AT5G23580.1
Brassicaceae Eutrema salsugineum 20 Thhalv10001816m.g.v1.0, Thhalv10004083m.g.v1.0 ...
Thhalv10012990m.g.v1.0, Thhalv10013236m.g.v1.0, Thhalv10013240m.g.v1.0, Thhalv10017647m.g.v1.0, Thhalv10018359m.g.v1.0, Thhalv10019860m.g.v1.0, Thhalv10020268m.g.v1.0, Thhalv10020475m.g.v1.0, Thhalv10022628m.g.v1.0, Thhalv10023804m.g.v1.0, Thhalv10024803m.g.v1.0, Thhalv10024899m.g.v1.0, Thhalv10025058m.g.v1.0, Thhalv10026767m.g.v1.0, Thhalv10027200m.g.v1.0, Thhalv10028567m.g.v1.0, Thhalv10028598m.g.v1.0, Thhalv10028617m.g.v1.0
Brassicaceae Schrenkiella parvula 18 Sp1g37540.v2.2, Sp2g02620.v2.2, Sp2g23610.v2.2 ...
Sp3g08980.v2.2, Sp3g18420.v2.2, Sp3g30640.v2.2, Sp4g21290.v2.2, Sp5g31150.v2.2, Sp6g04200.v2.2, Sp6g08040.v2.2, Sp6g25050.v2.2, Sp6g31460.v2.2, Sp6g37950.v2.2, Sp7g20130.v2.2, Sp7g21580.v2.2, Sp7g33110.v2.2, Sp7g37500.v2.2, SpUn0654_0010.v2.2
Brassicaceae Brassica nigra 30 BniB01g006110.2N, BniB01g006950.2N, BniB01g054380.2N ...
BniB02g013560.2N, BniB02g043330.2N, BniB02g049940.2N, BniB02g055770.2N, BniB02g059140.2N, BniB02g080650.2N, BniB02g087460.2N, BniB03g036430.2N, BniB03g065050.2N, BniB04g026370.2N, BniB05g000900.2N, BniB05g003060.2N, BniB05g013520.2N, BniB05g015130.2N, BniB05g025480.2N, BniB05g044320.2N, BniB05g056000.2N, BniB06g030590.2N, BniB07g024900.2N, BniB07g031370.2N, BniB07g040620.2N, BniB07g050590.2N, BniB08g001880.2N, BniB08g005720.2N, BniB08g024960.2N, BniB08g035430.2N, BniB08g047630.2N
Casuarinaceae Casuarina equisetifolia 10 Ceq01G1306, Ceq03G0247, Ceq03G0830, Ceq03G1015, Ceq04G1244 ...
Ceq04G1254, Ceq05G1605, Ceq07G1797, Ceq07G1799, Ceq08G1618
Casuarinaceae Casuarina glauca 10 Cgl01G1461, Cgl03G0292, Cgl03G0904, Cgl03G1100, Cgl04G1406 ...
Cgl04G1415, Cgl05G1601, Cgl07G1954, Cgl07G1956, Cgl08G1657
Cymodoceaceae Cymodocea nodosa 16 gene.Cymno01g00100, gene.Cymno01g12280, gene.Cymno02g10820 ...
gene.Cymno03g04590, gene.Cymno04g13190, gene.Cymno05g14330, gene.Cymno07g01460, gene.Cymno07g09040, gene.Cymno08g07620, gene.Cymno10g08430, gene.Cymno13g01160, gene.Cymno14g07400, gene.Cymno15g00760, gene.Cymno16g02260, gene.Cymno17g05540, gene.Cymno18g01710
Dunaliellaceae Dunaliella salina 6 Dusal.0190s00005.v1.0, Dusal.0206s00016.v1.0 ...
Dusal.0224s00021.v1.0, Dusal.0272s00004.v1.0, Dusal.0933s00003.v1.0, Dusal.1941s00001.v1.0
Hydrocharitaceae Thalassia testudinum 15 gene.Thate01g09490, gene.Thate02g02970, gene.Thate02g03040 ...
gene.Thate02g13120, gene.Thate02g39750, gene.Thate04g03190, gene.Thate05g13720, gene.Thate05g22480, gene.Thate06g09940, gene.Thate07g01440, gene.Thate07g10440, gene.Thate08g03330, gene.Thate08g10240, gene.Thate09g04200, gene.Thate09g15430
Malvaceae Hibiscus hamabo Siebold & Zucc. 12 nbisL1-mrna-11227, nbisL1-mrna-1384, nbisL1-mrna-1855 ...
nbisL1-mrna-3875, nbisL1-mrna-399, nbisL1-mrna-4074, nbisL1-mrna-5129, nbisL1-mrna-6020, nbisL1-mrna-6022, nbisL1-mrna-7286, nbisL1-mrna-9099, nbisL1-mrna-9216
Nitrariaceae Nitraria sibirica 10 evm.TU.LG01.1777, evm.TU.LG01.1876, evm.TU.LG02.2535 ...
evm.TU.LG05.1871, evm.TU.LG06.1416, evm.TU.LG06.160, evm.TU.LG08.439, evm.TU.LG09.119, evm.TU.LG10.1475, evm.TU.LG12.1123
Plantaginaceae Plantago ovata 14 Pov_00003625, Pov_00003644, Pov_00004388, Pov_00005282 ...
Pov_00005913, Pov_00007036, Pov_00017184, Pov_00020785, Pov_00022903, Pov_00024401, Pov_00036975, Pov_00037673, Pov_00039038, Pov_00040137
Plumbaginaceae Limonium bicolor 20 Lb1G05693, Lb1G06451, Lb2G11169, Lb2G11272, Lb2G12214 ...
Lb2G14691, Lb3G15940, Lb3G17843, Lb3G20062, Lb4G21684, Lb4G22051, Lb4G22053, Lb4G25826, Lb5G27607, Lb5G28136, Lb5G28162, Lb5G28164, Lb5G28166, Lb6G31508, Lb7G33091
Poaceae Echinochloa crus-galli 50 AH01.147, AH01.149, AH01.5169, AH02.2380, AH02.3620 ...
AH03.291, AH03.3159, AH04.423, AH05.121, AH05.1948, AH05.307, AH05.3490, AH07.3031, AH07.4052, AH09.1908, AH09.2076, BH01.5043, BH02.2489, BH02.3335, BH03.3344, BH03.372, BH03.3891, BH03.3894, BH04.198, BH04.455, BH05.141, BH05.2075, BH05.2076, BH05.360, BH07.2855, BH09.2076, BH09.2230, CH01.2627, CH01.454, CH01.457, CH01.5643, CH02.2668, CH02.3898, CH03.3531, CH03.441, CH04.215, CH04.448, CH05.1573, CH05.201, CH05.2149, CH05.3628, CH07.2933, CH07.3933, CH09.2217, CH09.2373
Poaceae Eleusine coracana subsp. coracana 34 gene-QOZ80_1AG0025110, gene-QOZ80_1AG0037140 ...
gene-QOZ80_1BG0075650, gene-QOZ80_1BG0087250, gene-QOZ80_2AG0141240, gene-QOZ80_2AG0151690, gene-QOZ80_2BG0196850, gene-QOZ80_2BG0207070, gene-QOZ80_3AG0213220, gene-QOZ80_3AG0213250, gene-QOZ80_3AG0232180, gene-QOZ80_3BG0258360, gene-QOZ80_3BG0258390, gene-QOZ80_3BG0295760, gene-QOZ80_4AG0306230, gene-QOZ80_4AG0307530, gene-QOZ80_4BG0337210, gene-QOZ80_4BG0338570, gene-QOZ80_5AG0361610, gene-QOZ80_5AG0368640, gene-QOZ80_5AG0383090, gene-QOZ80_5AG0390430, gene-QOZ80_5BG0410010, gene-QOZ80_5BG0416210, gene-QOZ80_5BG0429980, gene-QOZ80_5BG0438070, gene-QOZ80_7AG0556450, gene-QOZ80_7AG0569130, gene-QOZ80_7BG0587370, gene-QOZ80_7BG0600840, gene-QOZ80_9AG0671330, gene-QOZ80_9AG0673660, gene-QOZ80_9BG0694810, gene-QOZ80_9BG0697370
Poaceae Hordeum vulgare 18 HORVU.MOREX.r3.1HG0069650.1, HORVU.MOREX.r3.1HG0092880.1 ...
HORVU.MOREX.r3.2HG0141400.1, HORVU.MOREX.r3.2HG0151360.1, HORVU.MOREX.r3.2HG0188200.1, HORVU.MOREX.r3.2HG0196120.1, HORVU.MOREX.r3.3HG0273330.1, HORVU.MOREX.r3.3HG0295710.1, HORVU.MOREX.r3.4HG0349000.1, HORVU.MOREX.r3.4HG0356730.1, HORVU.MOREX.r3.4HG0410700.1, HORVU.MOREX.r3.5HG0450250.1, HORVU.MOREX.r3.5HG0451470.1, HORVU.MOREX.r3.5HG0462150.1, HORVU.MOREX.r3.5HG0517140.1, HORVU.MOREX.r3.5HG0517190.1, HORVU.MOREX.r3.6HG0604810.1, HORVU.MOREX.r3.6HG0633900.1
Poaceae Lolium multiflorum 17 gene-QYE76_000105, gene-QYE76_002733, gene-QYE76_003401 ...
gene-QYE76_013914, gene-QYE76_015112, gene-QYE76_024533, gene-QYE76_041012, gene-QYE76_042584, gene-QYE76_045491, gene-QYE76_055890, gene-QYE76_059455, gene-QYE76_061395, gene-QYE76_061398, gene-QYE76_064724, gene-QYE76_064780, gene-QYE76_065211, gene-QYE76_071195
Poaceae Oryza coarctata 37 Oco01G014860, Oco01G022770, Oco02G015190, Oco02G023490 ...
Oco03G026300, Oco04G019160, Oco04G026730, Oco05G001720, Oco05G025590, Oco05G025640, Oco06G001700, Oco06G026440, Oco06G026480, Oco07G012990, Oco07G014130, Oco08G012570, Oco08G013630, Oco09G012890, Oco10G013030, Oco10G017870, Oco13G001830, Oco13G008530, Oco14G001940, Oco14G009000, Oco19G009090, Oco20G008950, Oco21G000510, Oco21G002160, Oco22G001320, Oco22G003020, Oco22G009450, Oco23G001290, Oco23G001700, Oco23G002760, Oco23G006580, Oco24G002250, Oco24G006260
Poaceae Oryza sativa 19 LOC_Os01g43410.1, LOC_Os01g59360.1, LOC_Os02g46090.1 ...
LOC_Os02g58520.1, LOC_Os03g03660.1, LOC_Os03g57450.1, LOC_Os03g57510.1, LOC_Os04g47300.1, LOC_Os04g49510.1, LOC_Os05g41270.1, LOC_Os05g50810.1, LOC_Os07g06740.2, LOC_Os07g33110.2, LOC_Os10g39420.1, LOC_Os11g04170.1, LOC_Os11g07040.1, LOC_Os12g03970.1, LOC_Os12g07230.1, LOC_Os12g30150.1
Poaceae Paspalum vaginatum 18 gene-BS78_01G055800, gene-BS78_01G056100 ...
gene-BS78_01G495800, gene-BS78_02G040700, gene-BS78_02G292800, gene-BS78_03G199500, gene-BS78_03G311200, gene-BS78_04G236100, gene-BS78_04G330400, gene-BS78_05G033400, gene-BS78_05G078200, gene-BS78_05G163600, gene-BS78_06G189700, gene-BS78_06G199500, gene-BS78_08G041900, gene-BS78_08G071900, gene-BS78_09G186500, gene-BS78_09G252000
Poaceae Puccinellia tenuiflora 30 Pt_Chr0100525, Pt_Chr0103715, Pt_Chr0103732, Pt_Chr0104160 ...
Pt_Chr0104192, Pt_Chr0105293, Pt_Chr0105298, Pt_Chr0105316, Pt_Chr0105318, Pt_Chr0203770, Pt_Chr0301610, Pt_Chr0301666, Pt_Chr0301673, Pt_Chr0303569, Pt_Chr0304179, Pt_Chr0306599, Pt_Chr0307542, Pt_Chr0502419, Pt_Chr0504422, Pt_Chr0504481, Pt_Chr0505777, Pt_Chr0601773, Pt_Chr0603416, Pt_Chr0603436, Pt_Chr0604858, Pt_Chr0605529, Pt_Chr0702970, Pt_Chr0702974, Pt_Chr0703369, Pt_Chr0703495
Poaceae Sporobolus alterniflorus 53 Chr01G003210, Chr01G017970, Chr01G038360, Chr02G006840 ...
Chr02G014990, Chr03G011350, Chr03G018330, Chr04G005520, Chr04G015250, Chr04G021660, Chr04G023060, Chr04G030210, Chr05G018770, Chr05G026570, Chr06G004910, Chr06G015900, Chr06G023280, Chr06G024790, Chr07G006050, Chr07G020580, Chr07G021730, Chr07G029280, Chr08G011550, Chr09G023260, Chr0G004760, Chr0G005860, Chr0G019960, Chr0G033790, Chr12G001070, Chr12G035100, Chr15G000080, Chr15G006420, Chr16G010170, Chr18G012710, Chr18G016280, Chr19G005680, Chr19G010620, Chr19G012720, Chr22G000270, Chr22G005010, Chr23G005560, Chr23G006650, Chr24G001130, Chr24G008530, Chr26G013980, Chr27G003190, Chr27G005490, Chr27G011620, Chr28G001240, Chr28G007850, Chr30G004510, Chr31G000630, Chr31G001640
Poaceae Thinopyrum elongatum 18 Tel1E01G498800, Tel1E01G712500, Tel2E01G414800 ...
Tel2E01G460400, Tel2E01G696300, Tel2E01G773300, Tel3E01G384800, Tel3E01G533600, Tel4E01G176000, Tel4E01G202800, Tel4E01G529700, Tel5E01G202700, Tel5E01G244900, Tel5E01G668200, Tel5E01G668500, Tel6E01G484400, Tel6E01G786400, Telscf2101G000100
Poaceae Triticum dicoccoides 34 gene_TRIDC1AG045970, gene_TRIDC1AG062430 ...
gene_TRIDC1BG052010, gene_TRIDC1BG071580, gene_TRIDC2AG029830, gene_TRIDC2AG033800, gene_TRIDC2AG058740, gene_TRIDC2AG065100, gene_TRIDC2BG033530, gene_TRIDC2BG038220, gene_TRIDC2BG061760, gene_TRIDC2BG069500, gene_TRIDC3AG033670, gene_TRIDC3AG048090, gene_TRIDC3BG038210, gene_TRIDC3BG054220, gene_TRIDC4AG030020, gene_TRIDC4AG032780, gene_TRIDC4BG017040, gene_TRIDC4BG020540, gene_TRIDC5AG016950, gene_TRIDC5AG023440, gene_TRIDC5AG061700, gene_TRIDC5AG061750, gene_TRIDC5AG069790, gene_TRIDC5BG018720, gene_TRIDC5BG019150, gene_TRIDC5BG024550, gene_TRIDC5BG065760, gene_TRIDC5BG065810, gene_TRIDC6AG040110, gene_TRIDC6AG061550, gene_TRIDC6BG047030, gene_TRIDC6BG068590
Poaceae Triticum aestivum 53 TraesCS1A02G309400.2, TraesCS1A02G424200.1 ...
TraesCS1B02G320400.1, TraesCS1B02G456700.1, TraesCS1D02G308800.1, TraesCS1D02G433400.1, TraesCS2A02G223100.2, TraesCS2A02G248200.3, TraesCS2A02G407200.1, TraesCS2A02G456100.1, TraesCS2B02G248700.2, TraesCS2B02G269200.3, TraesCS2B02G424900.1, TraesCS2B02G478100.1, TraesCS2D02G229100.2, TraesCS2D02G249900.2, TraesCS2D02G404200.1, TraesCS2D02G456400.1, TraesCS3A02G224900.1, TraesCS3A02G334200.1, TraesCS3B02G254500.1, TraesCS3B02G365200.1, TraesCS3D02G228700.1, TraesCS3D02G327700.3, TraesCS4A02G187900.1, TraesCS4A02G206200.2, TraesCS4B02G109800.2, TraesCS4B02G130300.1, TraesCS4B02G321800.1, TraesCS4D02G107200.1, TraesCS4D02G125500.1, TraesCS4D02G318400.2, TraesCS5A02G107900.1, TraesCS5A02G138300.1, TraesCS5A02G426500.1, TraesCS5A02G426800.2, TraesCS5A02G490200.1, TraesCS5B02G109300.1, TraesCS5B02G115400.1, TraesCS5B02G137600.1, TraesCS5B02G428400.2, TraesCS5B02G428700.1, TraesCS5D02G122800.1, TraesCS5D02G124000.1, TraesCS5D02G153800.1, TraesCS5D02G434500.2, TraesCS5D02G434800.2, TraesCS6A02G261200.1, TraesCS6A02G421000.1, TraesCS6B02G288600.1, TraesCS6B02G467300.1, TraesCS6D02G242000.2, TraesCS6D02G404800.1
Poaceae Zea mays 25 Zm00001eb002180_P002, Zm00001eb060110_P001 ...
Zm00001eb060140_P001, Zm00001eb072810_P001, Zm00001eb091710_P003, Zm00001eb093410_P001, Zm00001eb105890_P001, Zm00001eb117300_P001, Zm00001eb132720_P001, Zm00001eb139060_P001, Zm00001eb150340_P001, Zm00001eb159530_P001, Zm00001eb187630_P001, Zm00001eb190570_P003, Zm00001eb196210_P001, Zm00001eb200920_P001, Zm00001eb213240_P001, Zm00001eb213280_P001, Zm00001eb322620_P001, Zm00001eb344900_P001, Zm00001eb358560_P001, Zm00001eb369270_P001, Zm00001eb408020_P001, Zm00001eb428080_P002, Zm00001eb429270_P001
Poaceae Zoysia japonica 26 nbis-gene-11651, nbis-gene-11652, nbis-gene-14309 ...
nbis-gene-15295, nbis-gene-15301, nbis-gene-16423, nbis-gene-16426, nbis-gene-22235, nbis-gene-22667, nbis-gene-24732, nbis-gene-25547, nbis-gene-25717, nbis-gene-26926, nbis-gene-27145, nbis-gene-29210, nbis-gene-3052, nbis-gene-31376, nbis-gene-39729, nbis-gene-40127, nbis-gene-41249, nbis-gene-46280, nbis-gene-4637, nbis-gene-51510, nbis-gene-5665, nbis-gene-58716, nbis-gene-893
Poaceae Zoysia macrostachya 25 Zma_g10680, Zma_g11372, Zma_g16895, Zma_g17489, Zma_g17628 ...
Zma_g18473, Zma_g20228, Zma_g20310, Zma_g2166, Zma_g21853, Zma_g24690, Zma_g24805, Zma_g25812, Zma_g2607, Zma_g2610, Zma_g26954, Zma_g28895, Zma_g325, Zma_g329, Zma_g4513, Zma_g5227, Zma_g6018, Zma_g6519, Zma_g8248, Zma_g8840
Portulacaceae Portulaca oleracea 27 evm.TU.LG02.1571, evm.TU.LG02.1597, evm.TU.LG04.2007 ...
evm.TU.LG04.2740, evm.TU.LG06.1363, evm.TU.LG06.325, evm.TU.LG08.1423, evm.TU.LG08.1424, evm.TU.LG08.394, evm.TU.LG08.411, evm.TU.LG08.904, evm.TU.LG09.366, evm.TU.LG09.396, evm.TU.LG10.446, evm.TU.LG11.703, evm.TU.LG12.1756, evm.TU.LG17.444, evm.TU.LG18.1682, evm.TU.LG18.1898, evm.TU.LG18.866, evm.TU.LG19.1453, evm.TU.LG20.1005, evm.TU.LG20.203, evm.TU.LG20.24, evm.TU.LG22.1022, evm.TU.LG22.320, evm.TU.LG26.541
Posidoniaceae Posidonia oceanica 11 gene.Posoc01g30060, gene.Posoc02g10860, gene.Posoc03g00270 ...
gene.Posoc03g22970, gene.Posoc05g17090, gene.Posoc05g19840, gene.Posoc06g15500, gene.Posoc07g01720, gene.Posoc07g09200, gene.Posoc09g08230, gene.Posoc10g02880
Rhizophoraceae Bruguiera sexangula 13 evm.TU.60359.6, evm.TU.60360.6, evm.TU.Scaffold_12_RagTag.84 ...
evm.TU.Scaffold_12_RagTag.997, evm.TU.Scaffold_13_RagTag.980, evm.TU.Scaffold_16_RagTag.124, evm.TU.Scaffold_1_RagTag.1080, evm.TU.Scaffold_1_RagTag.1302, evm.TU.Scaffold_1_RagTag.1313, evm.TU.Scaffold_1_RagTag.2398, evm.TU.Scaffold_7_RagTag.1316, evm.TU.Scaffold_7_RagTag.409, evm.TU.Scaffold_8_RagTag.1558
Rhizophoraceae Carallia pectinifolia 12 nbisL1-mrna-18441, nbisL1-mrna-18865, nbisL1-mrna-22366 ...
nbisL1-mrna-23945, nbisL1-mrna-24716, nbisL1-mrna-30038, nbisL1-mrna-5171, nbisL1-mrna-6283, nbisL1-mrna-6293, nbisL1-mrna-6528, nbisL1-mrna-8661, nbisL1-mrna-9786
Rhizophoraceae Ceriops tagal 13 nbisL1-mrna-11869, nbisL1-mrna-13481, nbisL1-mrna-14683 ...
nbisL1-mrna-15705, nbisL1-mrna-1616, nbisL1-mrna-16693, nbisL1-mrna-18138, nbisL1-mrna-18146, nbisL1-mrna-20607, nbisL1-mrna-21442, nbisL1-mrna-3030, nbisL1-mrna-4401, nbisL1-mrna-5607
Rhizophoraceae Ceriops zippeliana 11 nbisL1-mrna-10185, nbisL1-mrna-13064, nbisL1-mrna-13286 ...
nbisL1-mrna-15130, nbisL1-mrna-18059, nbisL1-mrna-20361, nbisL1-mrna-21128, nbisL1-mrna-21701, nbisL1-mrna-3184, nbisL1-mrna-4129, nbisL1-mrna-4137
Rhizophoraceae Kandelia candel 12 evm.TU.utg000002l.299, evm.TU.utg000002l.469 ...
evm.TU.utg000015l.584, evm.TU.utg000016l.12, evm.TU.utg000016l.379, evm.TU.utg000016l.386, evm.TU.utg000016l.863, evm.TU.utg000018l.692, evm.TU.utg000018l.89, evm.TU.utg000022l.419, evm.TU.utg000027l.37, evm.TU.utg000027l.520
Rhizophoraceae Kandelia obovata 11 Maker00002891, Maker00003685, Maker00011661, Maker00011954 ...
Maker00014224, Maker00015898, Maker00016284, Maker00017007, Maker00017157, Maker00017396, Maker00017978
Rhizophoraceae Rhizophora apiculata 13 nbisL1-mrna-10705, nbisL1-mrna-11047, nbisL1-mrna-12505 ...
nbisL1-mrna-3560, nbisL1-mrna-4490, nbisL1-mrna-4571, nbisL1-mrna-5477, nbisL1-mrna-7550, nbisL1-mrna-7556, nbisL1-mrna-8769, nbisL1-mrna-9001, nbisL1-mrna-9438, nbisL1-mrna-9595
Rhizophoraceae Rhizophora mangle 13 nbisL1-mrna-11621, nbisL1-mrna-13288, nbisL1-mrna-13484 ...
nbisL1-mrna-13491, nbisL1-mrna-18522, nbisL1-mrna-18689, nbisL1-mrna-20083, nbisL1-mrna-20812, nbisL1-mrna-22522, nbisL1-mrna-22719, nbisL1-mrna-23273, nbisL1-mrna-5672, nbisL1-mrna-6724
Salicaceae Populus euphratica 18 populus_peu01795, populus_peu03631, populus_peu06041 ...
populus_peu10323, populus_peu12376, populus_peu12386, populus_peu15408, populus_peu16631, populus_peu18502, populus_peu18929, populus_peu19746, populus_peu19758, populus_peu19903, populus_peu25994, populus_peu26003, populus_peu34472, populus_peu36023, populus_peu36941
Solanaceae Lycium barbarum 23 gene-LOC132599409, gene-LOC132604552, gene-LOC132606303 ...
gene-LOC132606687, gene-LOC132607242, gene-LOC132607254, gene-LOC132607611, gene-LOC132609915, gene-LOC132613482, gene-LOC132616196, gene-LOC132617294, gene-LOC132617847, gene-LOC132625947, gene-LOC132625966, gene-LOC132626379, gene-LOC132626381, gene-LOC132626994, gene-LOC132628149, gene-LOC132636345, gene-LOC132639963, gene-LOC132640538, gene-LOC132643647, gene-LOC132644097
Solanaceae Solanum chilense 21 SOLCI000081300, SOLCI000797600, SOLCI000938600 ...
SOLCI001317800, SOLCI001503100, SOLCI002135400, SOLCI002419800, SOLCI002509900, SOLCI003123200, SOLCI003137500, SOLCI003180800, SOLCI003418400, SOLCI003459800, SOLCI003511500, SOLCI003952100, SOLCI004169900, SOLCI004439400, SOLCI004457200, SOLCI005394900, SOLCI005760100, SOLCI007434400
Solanaceae Solanum pennellii 22 gene-LOC107001743, gene-LOC107002153, gene-LOC107002236 ...
gene-LOC107004090, gene-LOC107004840, gene-LOC107005042, gene-LOC107005509, gene-LOC107007186, gene-LOC107007192, gene-LOC107008511, gene-LOC107009560, gene-LOC107014935, gene-LOC107015024, gene-LOC107015444, gene-LOC107018053, gene-LOC107018307, gene-LOC107018336, gene-LOC107020234, gene-LOC107021066, gene-LOC107025816, gene-LOC107029060, gene-LOC107032472
Tamaricaceae Reaumuria soongarica 16 STRG.11630_chr02_-, STRG.20675_chr08_-, STRG.23388_chr05_+ ...
STRG.26471_chr11_-, gene_10610, gene_1132, gene_12207, gene_13141, gene_13237, gene_15166, gene_15444, gene_16091, gene_17574, gene_17984, gene_18010, gene_2433
Tamaricaceae Tamarix chinensis 12 TC01G3176, TC02G1376, TC03G2351, TC04G2924, TC05G2719 ...
TC05G2733, TC05G2956, TC06G0885, TC07G1649, TC08G0080, TC09G2458, TC12G0868
Zosteraceae Zostera marina 2 Zosma02g24030.v3.1, Zosma02g25780.v3.1
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.