Basic Information
Locus ID:
CH09.2185
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
DDE superfamily endonuclease
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| CH09 | 29407324 | 29411160 | + | CH09.2185 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.12 | 105,608.51 Da | 44.54 | 60.09 | -0.56 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13359 | DDE superfamily endonuclease | 803 | 861 | 4.4E-8 | IPR027806 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 906 | 930 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 422 | 463 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 905 | 930 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 394 | 463 | - | - |
| Coils | Coil | Coil | 509 | 540 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_002458391.2 | uncharacterized protein LOC8069780 [Sorghum bicolor] | 5.37E-107 |
| TrEMBL | A0A3L6TQ14 | Myb_DNA-bind_3 domain-containing protein OS=Panicum miliaceum OX=4540 GN=C2845_PM01G33420 PE=4 SV=1 | 1.28E-128 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||