Basic Information
Locus ID:
CH09.212
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Protein tyrosine kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| CH09 | 3404494 | 3409260 | + | CH09.212 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.77 | 42,947.61 Da | 41.36 | 101.58 | -0.21 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 310 | 341 | 3.2E-5 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 185 | 341 | 1.66E-24 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 279 | 371 | 3.9E-7 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 176 | 271 | 1.7E-20 | - |
| Gene3D | G3DSA:1.20.930.20 | - | 3 | 120 | 2.0E-25 | IPR036537 |
| SMART | SM00220 | serkin_6 | 202 | 382 | 5.5E-4 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 202 | 386 | 11.199088 | IPR000719 |
| Coils | Coil | Coil | 65 | 85 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G11530.1 | cysteine-rich RLK (RECEPTOR-like protein kinase) 34. Encodes a cysteine-rich receptor-like protein kinase. | 9.99E-18 |
| RefSeq | XP_034607324.1 | putative receptor-like protein kinase At4g00960 isoform X2 [Setaria viridis] | 3.67E-173 |
| Q9LDQ3 | Cysteine-rich receptor-like protein kinase 34 OS=Arabidopsis thaliana OX=3702 GN=CRK34 PE=3 SV=3 | 9.85E-17 | |
| TrEMBL | A0A4U6TP21 | Protein kinase domain-containing protein OS=Setaria viridis OX=4556 GN=SEVIR_8G237200v2 PE=4 SV=1 | 7.19E-173 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Echinochloa crus-galli | 6 | AH04.2149, AH04.2150, AH06.444, BH04.2209, CH09.212 ... |
| Poaceae | Eleusine coracana subsp. coracana | 3 | gene-QOZ80_5AG0390620, gene-QOZ80_8AG0629730 ... |
| Poaceae | Hordeum vulgare | 3 | HORVU.MOREX.r3.3HG0315350.1, HORVU.MOREX.r3.3HG0315360.1 ... |
| Poaceae | Oryza sativa | 3 | LOC_Os12g14480.1, LOC_Os12g14610.1, LOC_Os12g14699.1 |
| Poaceae | Paspalum vaginatum | 16 | gene-BS78_05G233500, gene-BS78_05G233900, gene-BS78_K259300 ... |
| Poaceae | Puccinellia tenuiflora | 2 | Pt_Chr0205570, Pt_Chr0205659 |
| Poaceae | Sporobolus alterniflorus | 1 | Chr27G005670 |
| Poaceae | Thinopyrum elongatum | 1 | Tel1E01G066400 |
| Poaceae | Triticum dicoccoides | 1 | gene_TRIDC3BG074570 |
| Poaceae | Triticum aestivum | 4 | TraesCS1B02G036700.1, TraesCS1D02G030000.2 ... |
| Poaceae | Zoysia macrostachya | 2 | Zma_g25837, Zma_g25838 |