Basic Information
Locus ID:
CH09.211
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| CH09 | 3388765 | 3397594 | + | CH09.211 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.53 | 139,696.28 Da | 57.18 | 75.56 | -0.51 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF16796 | Microtubule binding | 523 | 681 | 1.7E-43 | IPR031852 |
| Pfam | PF00225 | Kinesin motor domain | 683 | 831 | 6.2E-54 | IPR001752 |
| Pfam | PF00307 | Calponin homology (CH) domain | 140 | 254 | 1.0E-12 | IPR001715 |
| SUPERFAMILY | SSF47576 | Calponin-homology domain, CH-domain | 132 | 262 | 1.06E-19 | IPR036872 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 537 | 863 | 1.67E-108 | IPR027417 |
| Gene3D | G3DSA:3.40.850.10 | Kinesin motor domain | 480 | 683 | 4.4E-52 | IPR036961 |
| Gene3D | G3DSA:3.40.850.10 | Kinesin motor domain | 684 | 873 | 5.9E-68 | IPR036961 |
| Gene3D | G3DSA:1.20.930.20 | - | 1087 | 1202 | 8.2E-16 | IPR036537 |
| Gene3D | G3DSA:1.10.418.10 | - | 126 | 272 | 4.5E-26 | IPR036872 |
| SMART | SM00129 | kinesin_4 | 535 | 839 | 5.3E-139 | IPR001752 |
| SMART | SM00033 | ch_5 | 140 | 255 | 5.2E-9 | IPR001715 |
| ProSiteProfiles | PS50067 | Kinesin motor domain profile. | 537 | 831 | 96.086418 | IPR001752 |
| ProSiteProfiles | PS50021 | Calponin homology (CH) domain profile. | 138 | 257 | 17.221786 | IPR001715 |
| PRINTS | PR00380 | Kinesin heavy chain signature | 611 | 632 | 5.7E-38 | IPR001752 |
| PRINTS | PR00380 | Kinesin heavy chain signature | 701 | 718 | 5.7E-38 | IPR001752 |
| PRINTS | PR00380 | Kinesin heavy chain signature | 732 | 750 | 5.7E-38 | IPR001752 |
| PRINTS | PR00380 | Kinesin heavy chain signature | 781 | 802 | 5.7E-38 | IPR001752 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 869 | 893 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 863 | 913 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 27 | 42 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 102 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 963 | 1029 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 371 | 418 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 997 | 1011 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 380 | 418 | - | - |
| Coils | Coil | Coil | 664 | 691 | - | - |
| Coils | Coil | Coil | 845 | 865 | - | - |
| Coils | Coil | Coil | 517 | 537 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G47500.2 | - | 1.16E-257 |
| RefSeq | XP_034570067.1 | kinesin-like protein KIN-14P [Setaria viridis] | 0 |
| B9G8P1 | Kinesin-like protein KIN-14P OS=Oryza sativa subsp. japonica OX=39947 GN=KIN14P PE=3 SV=2 | 0 | |
| TrEMBL | A0A368SAK1 | Kinesin-4 OS=Setaria italica OX=4555 GN=SETIT_8G227500v2 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology