Basic Information
Locus ID:
CH09.2005
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Protein FAR1-RELATED SEQUENCE
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| CH09 | 27971633 | 27978193 | - | CH09.2005 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.34 | 91,819.65 Da | 63.72 | 73.38 | -0.48 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF03101 | FAR1 DNA-binding domain | 519 | 558 | 4.9E-8 | IPR004330 |
| ProSiteProfiles | PS50966 | Zinc finger SWIM-type profile. | 710 | 746 | 8.65425 | IPR007527 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 86 | 106 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 131 | 157 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 85 | 106 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 132 | 157 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 71 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_047079695.1 | protein FAR1-RELATED SEQUENCE 5-like [Lolium rigidum] | 1.48E-52 |
| TrEMBL | A0A5J9V8P9 | SWIM-type domain-containing protein OS=Eragrostis curvula OX=38414 GN=EJB05_23567 PE=4 SV=1 | 3.64E-90 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology