Basic Information
Locus ID:
CH09.1630
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Broad-Complex, Tramtrack and Bric a brac
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| CH09 | 24860752 | 24862321 | + | CH09.1630 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.77 | 38,068.59 Da | 43.68 | 90.31 | -0.16 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00651 | BTB/POZ domain | 14 | 123 | 5.7E-9 | IPR000210 |
| Pfam | PF02135 | TAZ zinc finger | 228 | 291 | 4.4E-8 | IPR000197 |
| SUPERFAMILY | SSF54695 | POZ domain | 15 | 152 | 1.33E-7 | IPR011333 |
| SUPERFAMILY | SSF57933 | TAZ domain | 203 | 295 | 2.49E-14 | IPR035898 |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 3 | 126 | 1.4E-14 | IPR011333 |
| Gene3D | G3DSA:1.20.1020.10 | TAZ domain | 202 | 325 | 3.3E-15 | IPR035898 |
| Gene3D | G3DSA:1.25.40.420 | - | 127 | 201 | 2.7E-7 | - |
| SMART | SM00225 | BTB_4 | 16 | 127 | 4.6E-6 | IPR000210 |
| SMART | SM00551 | TAZ_2 | 203 | 292 | 1.4E-7 | IPR000197 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 16 | 89 | 10.344046 | IPR000210 |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G48360.1 | BTB and TAZ domain protein 2. encodes a protein (BT2) that is an essential component of the TAC1-mediated telomerase activation pathway. Acts redundantly with BT3 and BT1 during female gametophyte development and with BT3 during male gametophyte development. BT2 also mediates multiple responses to nutrients, stresses, and hormones. | 7.68E-63 |
| RefSeq | XP_004975990.1 | BTB/POZ and TAZ domain-containing protein 2 [Setaria italica] | 6.86E-191 |
| Q94BN0 | BTB/POZ and TAZ domain-containing protein 2 OS=Arabidopsis thaliana OX=3702 GN=BT2 PE=1 SV=1 | 7.44E-62 | |
| TrEMBL | A0A1E5WLI1 | BTB/POZ and TAZ domain-containing protein 2 OS=Dichanthelium oligosanthes OX=888268 GN=BAE44_0000713 PE=4 SV=1 | 9.7E-192 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology