halophFGD

Basic Information

Locus ID: CH09.1583

Species & Taxonomic ID: Echinochloa crus-galli & 90397

Genome Assembly: GWHBDNR00000000

Description: No apical meristem (NAM) protein

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
CH09	24492785	24536916	-	CH09.1583

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
9.10	71,046.71 Da	61.53	74.22	-0.62

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
Pfam	PF02365	No apical meristem (NAM) protein	306	461	1.8E-14	IPR003441
SUPERFAMILY	SSF101941	NAC domain	289	480	1.44E-26	IPR036093
Gene3D	G3DSA:2.170.150.80	NAC domain	330	484	7.3E-20	IPR036093
ProSiteProfiles	PS51005	NAC domain profile.	305	480	25.213892	IPR003441
MobiDBLite	mobidb-lite	consensus disorder prediction	57	128	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	177	201	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	112	128	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	498	525	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	177	196	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	1	28	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	1	17	-	-

Gene Ontology

Biological Process:

GO:0006355 (regulation of DNA-templated transcription)

Molecular Function:

GO:0003677 (DNA binding)

Best hit

Source	Best Hit ID	Description	E-value
TAIR	AT1G25580.1	NAC (No Apical Meristem) domain transcriptional regulator superfamily protein. Encodes suppressor of gamma response 1 (SOG1), a putative transcription factor governing multiple responses to DNA damage.	9.09E-55
RefSeq	XP_034602749.1	SUPPRESSOR OF GAMMA RESPONSE 1-like isoform X1 [Setaria viridis]	1.24E-188
Swiss-Prot	Q6NQK2	SUPPRESSOR OF GAMMA RESPONSE 1 OS=Arabidopsis thaliana OX=3702 GN=SOG1 PE=1 SV=1	8.84E-54
TrEMBL	A0A4U6TQ40	NAC domain-containing protein OS=Setaria viridis OX=4556 GN=SEVIR_7G145900v2 PE=4 SV=1	2.81E-187

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

🔍 Protein-Protein Interaction Network

Orthology

Family	Species	Count	Orthologous Genes
Acanthaceae	Avicennia marina	3	jg19865, jg30462, jg40402
Aizoaceae	Mesembryanthemum crystallinum	2	gene_17486, gene_3941
Amaranthaceae	Atriplex hortensis	2	Ah022760, Ah025939
Amaranthaceae	Beta vulgaris	1	BVRB_1g001950
Amaranthaceae	Salicornia bigelovii	5	Sbi_jg12746, Sbi_jg3789, Sbi_jg49043, Sbi_jg53150 ... Sbi_jg53151
Amaranthaceae	Salicornia europaea	2	Seu_jg6191, Seu_jg8734
Amaranthaceae	Suaeda aralocaspica	2	GOSA_00000680, GOSA_00018922
Amaranthaceae	Suaeda glauca	5	Sgl10795, Sgl16148, Sgl34124, Sgl34356, Sgl39757
Amaranthaceae	Chenopodium album	7	gene:ENSEOMG00000001969, gene:ENSEOMG00000003651 ... gene:ENSEOMG00000014682, gene:ENSEOMG00000028036, gene:ENSEOMG00000034859, gene:ENSEOMG00000048924, gene:ENSEOMG00000051343
Amaranthaceae	Chenopodium quinoa	4	CQ.Regalona.r1.1AG0004250, CQ.Regalona.r1.2BG0027050 ... CQ.Regalona.r1.6AG0015190, CQ.Regalona.r1.6BG0016030
Anacardiaceae	Pistacia vera	2	pistato.v30023190, pistato.v30225750
Apiaceae	Apium graveolens	4	Ag4G00758, Ag5G02130, Ag9G00444, Ag9G01400
Arecaceae	Cocos nucifera	2	COCNU_02G013750, scaffold012839G000020
Arecaceae	Phoenix dactylifera	3	gene-LOC103695945, gene-LOC103715028, gene-LOC103723156
Asparagaceae	Asparagus officinalis	2	AsparagusV1_09.1627.V1.1, AsparagusV1_Unassigned.486.V1.1
Asteraceae	Flaveria trinervia	4	Ftri13G09490, Ftri17G23051, Ftri18G05143, Ftri6G19954
Brassicaceae	Arabidopsis thaliana	3	AT1G25580.1, AT3G01600.1, AT5G14490.1
Brassicaceae	Eutrema salsugineum	3	Thhalv10007551m.g.v1.0, Thhalv10015728m.g.v1.0 ... Thhalv10022099m.g.v1.0
Brassicaceae	Schrenkiella parvula	3	Sp1g22630.v2.2, Sp3g00450.v2.2, Sp6g29520.v2.2
Brassicaceae	Brassica nigra	3	BniB04g040620.2N, BniB05g063400.2N, BniB08g006980.2N
Casuarinaceae	Casuarina equisetifolia	1	Ceq03G2032
Casuarinaceae	Casuarina glauca	1	Cgl03G2171
Cymodoceaceae	Cymodocea nodosa	2	gene.Cymno05g09760, gene.Cymno08g00930
Hydrocharitaceae	Thalassia testudinum	2	gene.Thate06g16850, gene.Thate09g00580
Malvaceae	Hibiscus hamabo Siebold & Zucc.	2	nbisL1-mrna-11602, nbisL1-mrna-2270
Nitrariaceae	Nitraria sibirica	2	evm.TU.LG03.501, evm.TU.LG05.277
Plantaginaceae	Plantago ovata	6	Pov_00000083, Pov_00019335, Pov_00024184, Pov_00024185 ... Pov_00027834, Pov_00027837
Plumbaginaceae	Limonium bicolor	2	Lb6G30208, Lb6G30633
Poaceae	Echinochloa crus-galli	15	AH01.4046, AH06.1110, AH07.2182, AH07.2450, AH07.3349 ... BH06.1137, BH07.2258, BH07.3172, BH09.1482, CH03.1787, CH06.1252, CH07.2329, CH07.3232, CH09.1583, CH09.1879
Poaceae	Eleusine coracana subsp. coracana	5	gene-QOZ80_2AG0136070, gene-QOZ80_2BG0191600 ... gene-QOZ80_4AG0313520, gene-QOZ80_6AG0516650, gene-QOZ80_6BG0468340
Poaceae	Hordeum vulgare	4	HORVU.MOREX.r3.2HG0175550.1, HORVU.MOREX.r3.2HG0175560.1 ... HORVU.MOREX.r3.3HG0305560.1, HORVU.MOREX.r3.7HG0670800.1
Poaceae	Lolium multiflorum	7	gene-QYE76_023415, gene-QYE76_023423, gene-QYE76_029357 ... gene-QYE76_044596, gene-QYE76_044597, gene-QYE76_044598, gene-QYE76_044601
Poaceae	Oryza coarctata	6	Oco03G014260, Oco04G014590, Oco07G008590, Oco08G008500 ... Oco11G007010, Oco12G007170
Poaceae	Oryza sativa	2	LOC_Os02g38130.1, LOC_Os04g40140.3
Poaceae	Paspalum vaginatum	6	gene-BS78_04G181400, gene-BS78_04G182400 ... gene-BS78_04G266500, gene-BS78_06G134500, gene-BS78_06G134800, gene-BS78_10G114100
Poaceae	Puccinellia tenuiflora	5	Pt_Chr0204439, Pt_Chr0302354, Pt_Chr0302355, Pt_Chr0403605 ... Pt_Chr0404477
Poaceae	Sporobolus alterniflorus	8	Chr06G008550, Chr09G012730, Chr11G018130, Chr13G008600 ... Chr15G010110, Chr23G010560, Chr25G009100, Chr26G009180
Poaceae	Thinopyrum elongatum	4	Tel2E01G586500, Tel2E01G586700, Tel6E01G410200 ... Tel7E01G379800
Poaceae	Triticum dicoccoides	5	gene_TRIDC2BG051830, gene_TRIDC6AG032360 ... gene_TRIDC6BG038730, gene_TRIDC7AG026230, gene_TRIDC7BG016820
Poaceae	Triticum aestivum	13	TraesCS2A02G326300.2, TraesCS2A02G326400.1 ... TraesCS2B02G355400.1, TraesCS2B02G355500.1, TraesCS2B02G355600.1, TraesCS2B02G355700.1, TraesCS2D02G336500.1, TraesCS6A02G208900.3, TraesCS6B02G237900.3, TraesCS6D02G192400.1, TraesCS7A02G208200.1, TraesCS7B02G115400.1, TraesCS7D02G210600.1
Poaceae	Zea mays	6	Zm00001eb183700_P001, Zm00001eb246010_P001 ... Zm00001eb280480_P001, Zm00001eb280490_P001, Zm00001eb308090_P001, Zm00001eb424870_P002
Poaceae	Zoysia japonica	3	nbis-gene-18650, nbis-gene-29763, nbis-gene-50357
Poaceae	Zoysia macrostachya	5	Zma_g13806, Zma_g16601, Zma_g21461, Zma_g21462, Zma_g29478
Portulacaceae	Portulaca oleracea	5	evm.TU.LG03.80, evm.TU.LG04.1721, evm.TU.LG10.1209 ... evm.TU.LG13.620, evm.TU.LG21.310
Posidoniaceae	Posidonia oceanica	2	gene.Posoc01g21470, gene.Posoc05g02720
Rhizophoraceae	Bruguiera sexangula	3	evm.TU.Scaffold_15_RagTag.117, evm.TU.Scaffold_17_RagTag.942 ... evm.TU.Scaffold_3_RagTag.1941
Rhizophoraceae	Carallia pectinifolia	4	nbisL1-mrna-14932, nbisL1-mrna-23670, nbisL1-mrna-2418 ... nbisL1-mrna-2557
Rhizophoraceae	Ceriops tagal	4	nbisL1-mrna-10143, nbisL1-mrna-10144, nbisL1-mrna-15918 ... nbisL1-mrna-620
Rhizophoraceae	Ceriops zippeliana	4	nbisL1-mrna-101, nbisL1-mrna-17449, nbisL1-mrna-21924 ... nbisL1-mrna-3103
Rhizophoraceae	Kandelia candel	4	evm.TU.utg000001l.69, evm.TU.utg000011l.82 ... evm.TU.utg000013l.528, evm.TU.utg000019l.53
Rhizophoraceae	Kandelia obovata	3	Maker00002105, Maker00004387, Maker00004695
Rhizophoraceae	Rhizophora apiculata	4	nbisL1-mrna-10921, nbisL1-mrna-11653, nbisL1-mrna-11893 ... nbisL1-mrna-12023
Rhizophoraceae	Rhizophora mangle	2	nbisL1-mrna-23119, nbisL1-mrna-2819
Salicaceae	Populus euphratica	4	populus_peu01111, populus_peu07024, populus_peu07025 ... populus_peu20982
Solanaceae	Lycium barbarum	2	gene-LOC132621296, gene-LOC132641826
Solanaceae	Solanum chilense	2	SOLCI002192300, SOLCI003282700
Solanaceae	Solanum pennellii	2	gene-LOC107009331, gene-LOC107018601
Tamaricaceae	Reaumuria soongarica	1	gene_1608
Tamaricaceae	Tamarix chinensis	3	TC01G2119, TC03G1326, TC04G0246
Zosteraceae	Zostera marina	1	Zosma03g28530.v3.1