Basic Information
Locus ID:
CH09.1408
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| CH09 | 22888705 | 22891113 | + | CH09.1408 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 10.66 | 73,802.37 Da | 60.91 | 73.89 | -0.43 |
Protein Domain:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_004967313.1 | uncharacterized protein LOC101759482 [Setaria italica] | 8.71E-190 |
| TrEMBL | A0A368QZI2 | DUF295 domain-containing protein OS=Setaria italica OX=4555 GN=SETIT_4G292500v2 PE=4 SV=1 | 1.97E-188 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Echinochloa crus-galli | 7 | AH05.1595, AH05.2825, AH09.1187, BH05.1751, CH04.2131 ... |
| Poaceae | Eleusine coracana subsp. coracana | 1 | gene-QOZ80_2BG0160850 |
| Poaceae | Hordeum vulgare | 2 | HORVU.MOREX.r3.6HG0616380.1.CDS1 ... |
| Poaceae | Oryza coarctata | 1 | Oco04G014900 |
| Poaceae | Oryza sativa | 1 | LOC_Os08g18870.1 |
| Poaceae | Puccinellia tenuiflora | 4 | Pt_Chr0301262, Pt_Chr0306832, Pt_Chr0306837, Pt_Chr0502826 |
| Poaceae | Triticum aestivum | 4 | TraesCS6A02G341300.1.cds1, TraesCS6B02G372700.1.cds1 ... |
| Poaceae | Zoysia japonica | 1 | nbis-gene-12384 |
| Poaceae | Zoysia macrostachya | 1 | Zma_g25684 |