Basic Information
Locus ID:
CH09.1287
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| CH09 | 21565221 | 21568230 | - | CH09.1287 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.04 | 53,828.94 Da | 57.82 | 98.56 | -0.07 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00646 | F-box domain | 21 | 57 | 4.3E-5 | IPR001810 |
| SUPERFAMILY | SSF81383 | F-box domain | 9 | 64 | 6.28E-10 | IPR036047 |
| SUPERFAMILY | SSF52047 | RNI-like | 132 | 409 | 2.59E-12 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 83 | 434 | 1.4E-17 | IPR032675 |
| Gene3D | G3DSA:1.20.1280.50 | - | 18 | 68 | 4.2E-7 | - |
| ProSiteProfiles | PS50181 | F-box domain profile. | 18 | 66 | 8.570165 | IPR001810 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G13960.1 | F-box/RNI-like superfamily protein. | 2.75E-9 |
| RefSeq | XP_039818606.1 | MEIOTIC F-BOX protein MOF-like [Panicum virgatum] | 4.57E-132 |
| O23257 | Putative F-box/LRR-repeat protein At4g13960 OS=Arabidopsis thaliana OX=3702 GN=At4g13960 PE=4 SV=1 | 2.31E-6 | |
| TrEMBL | K3YCW4 | F-box domain-containing protein OS=Setaria italica OX=4555 GN=SETIT_7G106900v2 PE=4 SV=1 | 2.75E-143 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology