Basic Information
Locus ID:
CH09.1281
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| CH09 | 21499924 | 21504424 | + | CH09.1281 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.15 | 77,785.71 Da | 43.09 | 96.21 | -0.13 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00651 | BTB/POZ domain | 559 | 622 | 1.6E-8 | IPR000210 |
| SUPERFAMILY | SSF52047 | RNI-like | 138 | 402 | 1.18E-11 | - |
| SUPERFAMILY | SSF81383 | F-box domain | 8 | 60 | 4.19E-9 | IPR036047 |
| SUPERFAMILY | SSF54695 | POZ domain | 554 | 624 | 6.67E-11 | IPR011333 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 74 | 450 | 1.0E-13 | IPR032675 |
| Gene3D | G3DSA:1.25.40.420 | - | 626 | 692 | 1.5E-12 | - |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 550 | 621 | 4.8E-14 | IPR011333 |
| ProSiteProfiles | PS50181 | F-box domain profile. | 16 | 69 | 8.517177 | IPR001810 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G19000.1 | BTB-POZ and MATH domain 1. | 9.46E-29 |
| RefSeq | XP_039819407.1 | MEIOTIC F-BOX protein MOF-like isoform X1 [Panicum virgatum] | 1.72E-148 |
| Q8L765 | BTB/POZ and MATH domain-containing protein 1 OS=Arabidopsis thaliana OX=3702 GN=BPM1 PE=1 SV=1 | 9.27E-28 | |
| TrEMBL | A0A3L6QBL4 | F-box domain-containing protein OS=Panicum miliaceum OX=4540 GN=C2845_PM15G09010 PE=4 SV=1 | 2.36E-179 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology