Basic Information
Locus ID:
CH09.1214
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| CH09 | 20926557 | 20929187 | + | CH09.1214 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.97 | 55,114.48 Da | 48.13 | 86.63 | -0.36 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 186 | 452 | 1.59902E-102 | - |
| Pfam | PF00069 | Protein kinase domain | 181 | 447 | 9.9E-46 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 159 | 454 | 1.6E-78 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 256 | 461 | 3.6E-59 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 163 | 255 | 1.5E-32 | - |
| SMART | SM00220 | serkin_6 | 180 | 451 | 1.2E-35 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 180 | 459 | 37.163246 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 186 | 208 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 302 | 314 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 123 | 158 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 472 | 491 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 64 | 106 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 459 | 504 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G01540.2 | Protein kinase superfamily protein. | 2.78E-186 |
| RefSeq | XP_039772864.1 | probable serine/threonine-protein kinase At1g01540 isoform X2 [Panicum virgatum] | 0 |
| Q3EDL4 | Probable serine/threonine-protein kinase At1g01540 OS=Arabidopsis thaliana OX=3702 GN=At1g01540 PE=1 SV=2 | 2.67E-185 | |
| TrEMBL | A0A8T0QF42 | Protein kinase domain-containing protein OS=Panicum virgatum OX=38727 GN=PVAP13_7KG156500 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology