Basic Information
Locus ID:
CH09.1080
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Alkaline and neutral invertase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| CH09 | 19363272 | 19367111 | + | CH09.1080 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.20 | 65,483.17 Da | 50.38 | 86.58 | -0.26 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF12899 | Alkaline and neutral invertase | 104 | 544 | 1.3E-214 | IPR024746 |
| SUPERFAMILY | SSF48208 | Six-hairpin glycosidases | 111 | 542 | 1.7E-50 | IPR008928 |
| Gene3D | G3DSA:1.50.10.10 | - | 137 | 537 | 9.3E-11 | IPR012341 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 34 | 60 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G22510.1 | alkaline/neutral invertase. Encodes a chloroplast-targeted alkaline/neutral invertase that is implicated in the development of the photosynthetic apparatus and nitrogen assimilation in seedlings to control the sucrose to hexose ratio. | 7.15E-306 |
| RefSeq | XP_025823889.1 | neutral/alkaline invertase 3, chloroplastic-like isoform X1 [Panicum hallii] | 0 |
| Q6H6N5 | Neutral/alkaline invertase 3, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=NIN3 PE=2 SV=1 | 0 | |
| TrEMBL | A0A2T7CUK7 | Alkaline/neutral invertase OS=Panicum hallii var. hallii OX=1504633 GN=GQ55_7G130300 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology