Basic Information
Locus ID:
CH08.969
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Cysteine-rich receptor-like protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| CH08 | 12805065 | 12834283 | + | CH08.969 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 10.29 | 76,947.88 Da | 74.53 | 72.42 | -0.51 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 432 | 514 | 1.4E-13 | IPR001245 |
| Pfam | PF00069 | Protein kinase domain | 530 | 603 | 1.9E-12 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 415 | 670 | 2.39E-54 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 504 | 677 | 1.3E-33 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 400 | 503 | 3.3E-31 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 429 | 672 | 15.170742 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 435 | 457 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 15 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 194 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 61 | 89 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 279 | 311 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 284 | 299 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 40 | 59 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G23180.1 | cysteine-rich RLK (RECEPTOR-like protein kinase) 10. Encodes a receptor-like protein kinase. Naming convention from Chen et al 2003 (PMID 14756307) | 3.56E-87 |
| RefSeq | XP_034601041.1 | cysteine-rich receptor-like protein kinase 15 [Setaria viridis] | 1.19E-180 |
| Q8GYA4 | Cysteine-rich receptor-like protein kinase 10 OS=Arabidopsis thaliana OX=3702 GN=CRK10 PE=1 SV=3 | 3.46E-86 | |
| TrEMBL | A0A4U6UG24 | Protein kinase domain-containing protein OS=Setaria viridis OX=4556 GN=SEVIR_6G092500v2 PE=4 SV=1 | 2.7E-179 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
No orthogroup found for CH08.969.