Basic Information
Locus ID:
CH08.962
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Protein FAR1-RELATED SEQUENCE
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| CH08 | 12660554 | 12675007 | - | CH08.962 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.65 | 161,995.55 Da | 51.15 | 69.95 | -0.61 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF03101 | FAR1 DNA-binding domain | 266 | 345 | 1.1E-16 | IPR004330 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 1184 | 1266 | 1.3E-12 | IPR001245 |
| Pfam | PF10551 | MULE transposase domain | 439 | 532 | 4.1E-26 | IPR018289 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 1170 | 1375 | 4.07E-37 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 1255 | 1385 | 6.8E-20 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 1148 | 1254 | 3.2E-31 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 1182 | 1430 | 12.202602 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 1188 | 1210 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 112 | 130 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 843 | 871 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 85 | 101 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 965 | 998 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 203 | 228 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 82 | 137 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 843 | 862 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 970 | 989 | - | - |
| Coils | Coil | Coil | 755 | 775 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G38180.1 | FAR1-related sequence 5. | 1.48E-71 |
| RefSeq | XP_047079695.1 | protein FAR1-RELATED SEQUENCE 5-like [Lolium rigidum] | 1.46E-162 |
| Q9SZL8 | Protein FAR1-RELATED SEQUENCE 5 OS=Arabidopsis thaliana OX=3702 GN=FRS5 PE=1 SV=1 | 1.44E-70 | |
| TrEMBL | A0A0A9RI25 | Protein FAR1-RELATED SEQUENCE OS=Arundo donax OX=35708 PE=3 SV=1 | 2.95E-280 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology