Basic Information
Locus ID:
CH08.94
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Leucine rich repeat
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| CH08 | 1008292 | 1011602 | - | CH08.94 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.54 | 73,372.46 Da | 38.65 | 93.01 | -0.11 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 427 | 690 | 1.14121E-90 | - |
| Pfam | PF13855 | Leucine rich repeat | 177 | 236 | 2.7E-8 | IPR001611 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 426 | 690 | 4.4E-34 | IPR001245 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 35 | 77 | 3.2E-9 | IPR013210 |
| SUPERFAMILY | SSF52058 | L domain-like | 36 | 247 | 4.16E-44 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 400 | 690 | 2.74E-51 | IPR011009 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 36 | 151 | 8.1E-25 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 153 | 262 | 9.9E-33 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 500 | 694 | 2.2E-39 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 383 | 499 | 2.0E-24 | - |
| SMART | SM00369 | LRR_typ_2 | 151 | 175 | 8.8 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 199 | 223 | 27.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 103 | 127 | 34.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 421 | 694 | 26.873693 | IPR000719 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 286 | 305 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 279 | 305 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G45340.1 | Leucine-rich repeat protein kinase family protein. | 1.46E-160 |
| RefSeq | XP_025821391.1 | probably inactive leucine-rich repeat receptor-like protein kinase IMK2 [Panicum hallii] | 0 |
| Q9CAL2 | Cysteine-rich receptor-like protein kinase 3 OS=Arabidopsis thaliana OX=3702 GN=CRK3 PE=2 SV=1 | 3.32E-43 | |
| TrEMBL | A0A3L6PQM2 | Somatic embryogenesis receptor kinase 5-like OS=Panicum miliaceum OX=4540 GN=C2845_PM14G01240 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology