Basic Information
Locus ID:
CH08.892
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
BTB/POZ domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| CH08 | 11133404 | 11135443 | + | CH08.892 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.48 | 64,894.58 Da | 66.12 | 67.80 | -0.42 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00651 | BTB/POZ domain | 471 | 598 | 2.0E-20 | IPR000210 |
| SUPERFAMILY | SSF54695 | POZ domain | 456 | 596 | 6.28E-26 | IPR011333 |
| SUPERFAMILY | SSF49599 | TRAF domain-like | 333 | 444 | 4.9E-5 | - |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 446 | 597 | 3.3E-32 | IPR011333 |
| SMART | SM00225 | BTB_4 | 478 | 599 | 7.8E-18 | IPR000210 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 478 | 542 | 17.955021 | IPR000210 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 144 | 168 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 218 | 233 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 206 | 268 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 81 | 101 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 22 | 168 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 105 | 126 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 63 | 77 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G06190.5 | - | 1.53E-24 |
| RefSeq | XP_002444068.2 | BTB/POZ and MATH domain-containing protein 2 [Sorghum bicolor] | 3.39E-62 |
| Q9M8J9 | BTB/POZ and MATH domain-containing protein 2 OS=Arabidopsis thaliana OX=3702 GN=BPM2 PE=1 SV=1 | 2.96E-23 | |
| TrEMBL | A0A3L6RIU7 | BTB domain-containing protein OS=Panicum miliaceum OX=4540 GN=C2845_PM13G07030 PE=4 SV=1 | 9.36E-82 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
No orthogroup found for CH08.892.