Basic Information
Locus ID:
CH08.848
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| CH08 | 10161049 | 10162519 | + | CH08.848 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.18 | 48,620.83 Da | 44.98 | 82.49 | -0.16 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 112 | 320 | 1.0E-39 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 91 | 412 | 3.1E-68 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 192 | 423 | 6.4E-52 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 83 | 191 | 1.9E-20 | - |
| SMART | SM00220 | serkin_6 | 109 | 411 | 7.7E-23 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 109 | 426 | 33.205727 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 243 | 255 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 115 | 143 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G38240.3 | - | 8.81E-69 |
| RefSeq | XP_025821892.1 | rust resistance kinase Lr10-like [Panicum hallii] | 6.81E-246 |
| F4KA50 | LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-like 2.2 OS=Arabidopsis thaliana OX=3702 GN=LRK10L-2.2 PE=3 SV=2 | 2.18E-67 | |
| TrEMBL | A0A8T0R9N3 | Protein kinase domain-containing protein OS=Panicum virgatum OX=38727 GN=PVAP13_6KG367900 PE=3 SV=1 | 3.17E-249 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology