Basic Information
Locus ID:
CH08.832
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Broad-Complex, Tramtrack and Bric a brac
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| CH08 | 9741966 | 9742638 | + | CH08.832 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.05 | 18,849.99 Da | 53.35 | 76.81 | -0.18 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00121 | MATH | 28 | 147 | 5.28986E-7 | IPR002083 |
| SUPERFAMILY | SSF49599 | TRAF domain-like | 25 | 118 | 1.62E-9 | - |
| Gene3D | G3DSA:2.60.210.10 | Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A | 26 | 141 | 3.4E-8 | IPR008974 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 20 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_003571552.1 | BTB/POZ and MATH domain-containing protein 2 [Brachypodium distachyon] | 6.68E-10 |
| TrEMBL | A0A1E5UZ38 | BTB/POZ and MATH domain-containing protein 1 OS=Dichanthelium oligosanthes OX=888268 GN=BAE44_0020875 PE=4 SV=1 | 5.1E-14 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Echinochloa crus-galli | 4 | AH08.700, BH08.747, CH08.832, CH09.1648 |
| Poaceae | Eleusine coracana subsp. coracana | 2 | gene-QOZ80_8AG0622370, gene-QOZ80_8BG0650660 |