halophFGD

Basic Information

Locus ID: CH08.831

Species & Taxonomic ID: Echinochloa crus-galli & 90397

Genome Assembly: GWHBDNR00000000

Description: Broad-Complex, Tramtrack and Bric a brac

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
CH08	9711317	9711991	-	CH08.831

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
7.00	24,347.50 Da	52.02	78.80	-0.21

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
CDD	cd00121	MATH	20	147	9.94504E-17	IPR002083
Pfam	PF00651	BTB/POZ domain	175	219	1.9E-9	IPR000210
SUPERFAMILY	SSF49599	TRAF domain-like	16	153	1.57E-24	-
SUPERFAMILY	SSF54695	POZ domain	162	221	1.46E-13	IPR011333
Gene3D	G3DSA:2.60.210.10	Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A	16	150	1.7E-20	IPR008974
Gene3D	G3DSA:3.30.710.10	Potassium Channel Kv1.1; Chain A	151	223	7.8E-17	IPR011333
ProSiteProfiles	PS50097	BTB domain profile.	184	224	12.288154	IPR000210
ProSiteProfiles	PS50144	MATH/TRAF domain profile.	17	146	11.032505	IPR002083

Gene Ontology

Molecular Function:

GO:0005515 (protein binding)

KEGG Pathway

KO Term:

K10523 (speckle-type POZ protein)

Pathway:

ko04340 (Hedgehog signaling pathway) map04340 (Hedgehog signaling pathway) ko04341 (Hedgehog signaling pathway - fly) map04341 (Hedgehog signaling pathway - fly)

Best hit

Source	Best Hit ID	Description	E-value
TAIR	AT5G19000.1	BTB-POZ and MATH domain 1.	1.04E-37
RefSeq	XP_039853395.1	BTB/POZ and MATH domain-containing protein 1-like [Panicum virgatum]	2.09E-126
Swiss-Prot	Q8L765	BTB/POZ and MATH domain-containing protein 1 OS=Arabidopsis thaliana OX=3702 GN=BPM1 PE=1 SV=1	1.02E-36
TrEMBL	A0A8T0R9I0	BTB/POZ and MATH domain-containing protein 2 OS=Panicum virgatum OX=38727 GN=PVAP13_6KG109900 PE=4 SV=1	4.72E-125

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

🔍 Protein-Protein Interaction Network

Orthology

Family	Species	Count	Orthologous Genes
Poaceae	Echinochloa crus-galli	2	BH08.750, CH08.831
Poaceae	Eleusine coracana subsp. coracana	13	gene-QOZ80_1AG0015000, gene-QOZ80_1AG0021060 ... gene-QOZ80_1BG0070830, gene-QOZ80_8AG0622320, gene-QOZ80_8AG0622330, gene-QOZ80_8AG0622440, gene-QOZ80_8BG0650490, gene-QOZ80_8BG0650500, gene-QOZ80_8BG0650560, gene-QOZ80_8BG0650580, gene-QOZ80_8BG0650670, gene-QOZ80_8BG0650690, gene-QOZ80_8BG0650890
Poaceae	Hordeum vulgare	8	HORVU.MOREX.r3.2HG0203960.1.CDS1 ... HORVU.MOREX.r3.3HG0315010.1.CDS1, HORVU.MOREX.r3.5HG0428360.1.CDS1, HORVU.MOREX.r3.5HG0521670.1.CDS1, HORVU.MOREX.r3.5HG0521740.1.CDS1, HORVU.MOREX.r3.5HG0523460.1.CDS1, HORVU.MOREX.r3.5HG0523530.1.CDS1, HORVU.MOREX.r3.6HG0608320.1.CDS1
Poaceae	Lolium multiflorum	14	gene-QYE76_002089, gene-QYE76_025251, gene-QYE76_032441 ... gene-QYE76_032457, gene-QYE76_032458, gene-QYE76_032466, gene-QYE76_033077, gene-QYE76_033202, gene-QYE76_045021, gene-QYE76_045023, gene-QYE76_045044, gene-QYE76_047037, gene-QYE76_061086, gene-QYE76_061088
Poaceae	Oryza coarctata	6	Oco13G000570, Oco15G004430, Oco15G004440, Oco15G004530 ... Oco16G004240, Oco16G004260
Poaceae	Oryza sativa	8	LOC_Os08g12960.1, LOC_Os08g13000.1, LOC_Os08g13030.1 ... LOC_Os08g13060.1, LOC_Os08g13070.1, LOC_Os08g13090.1, LOC_Os08g13180.1, LOC_Os08g13250.1
Poaceae	Paspalum vaginatum	7	gene-BS78_07G085000, gene-BS78_07G087600 ... gene-BS78_07G087700, gene-BS78_07G087900, gene-BS78_07G089000, gene-BS78_07G112200, gene-BS78_09G004100
Poaceae	Puccinellia tenuiflora	5	Pt_Chr0304944, Pt_Chr0304972, Pt_Chr0402463, Pt_Chr0700706 ... Pt_Chr0703725
Poaceae	Sporobolus alterniflorus	5	Chr16G002950, Chr17G002660, Chr17G002930, Chr20G009960 ... Chr29G009610
Poaceae	Thinopyrum elongatum	16	Tel2E01G139200, Tel3E01G573600, Tel3E01G738800 ... Tel4E01G194200, Tel5E01G094800, Tel5E01G094900, Tel5E01G095500, Tel5E01G713700, Tel5E01G713800, Tel5E01G714700, Tel5E01G730000, Tel5E01G730600, Tel6E01G504000, Tel6E01G732200, Tel6E01G732300, Tel7E01G299100
Poaceae	Triticum dicoccoides	24	gene_TRIDC2AG006740, gene_TRIDC2BG055980 ... gene_TRIDC3AG045740, gene_TRIDC3BG051930, gene_TRIDC4AG030830, gene_TRIDC4BG019020, gene_TRIDC5AG006200, gene_TRIDC5AG006240, gene_TRIDC5AG006280, gene_TRIDC5AG064800, gene_TRIDC5AG064810, gene_TRIDC5AG064860, gene_TRIDC5AG066270, gene_TRIDC5AG066290, gene_TRIDC5BG007100, gene_TRIDC5BG069750, gene_TRIDC5BG069790, gene_TRIDC5BG071220, gene_TRIDC5BG071250, gene_TRIDC6AG042220, gene_TRIDC6AG059050, gene_TRIDC6BG049170, gene_TRIDC7AG017940, gene_TRIDC7BG007330
Poaceae	Triticum aestivum	47	TraesCS2A02G508000.1, TraesCS2B02G074000.1 ... TraesCS2B02G383700.1.cds1, TraesCS2B02G383900.1.cds1, TraesCS2B02G384100.1.cds1, TraesCS2D02G059500.1, TraesCS3B02G507600.1.cds1, TraesCS4A02G193000.1.cds1, TraesCS4B02G122200.1.cds1, TraesCS4D02G120300.1.cds1, TraesCS5A02G040800.1.cds1, TraesCS5A02G040900.1.cds1, TraesCS5A02G041300.1.cds1, TraesCS5A02G041400.1.cds1, TraesCS5A02G451500.1.cds1, TraesCS5A02G451600.1, TraesCS5A02G451700.1, TraesCS5A02G451900.1.cds1, TraesCS5A02G461800.1, TraesCS5A02G462000.1.cds1, TraesCS5B02G042100.1.cds1, TraesCS5B02G042300.1.cds1, TraesCS5B02G043200.1.cds1, TraesCS5B02G460300.1.cds1, TraesCS5B02G460400.1.cds1, TraesCS5B02G460600.1.cds1, TraesCS5B02G472000.1.cds1, TraesCS5B02G472100.1.cds1, TraesCS5B02G472400.1.cds1, TraesCS5B02G472500.1.cds1, TraesCS5B02G472600.1.cds1, TraesCS5B02G472700.1.cds1, TraesCS5D02G047800.1, TraesCS5D02G047900.1.cds1, TraesCS5D02G048000.1.cds1, TraesCS5D02G048300.1.cds1, TraesCS5D02G461700.1.cds1, TraesCS5D02G461800.1, TraesCS5D02G462100.1.cds1, TraesCS5D02G474700.1.cds1, TraesCS6A02G275800.1.cds1, TraesCS6A02G401700.1.cds1, TraesCS6B02G303100.1.cds1, TraesCS6B02G443900.1.cds1, TraesCS6D02G256000.1.cds1, TraesCS7B02G049700.1, TraesCS7D02G148800.1.cds1
Poaceae	Zea mays	1	Zm00001eb170960_P001
Poaceae	Zoysia japonica	2	nbis-gene-37558, nbis-gene-51285
Poaceae	Zoysia macrostachya	3	Zma_g20780, Zma_g22653, Zma_g23801