Basic Information
Locus ID:
CH08.730
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
LRR-repeat protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| CH08 | 8090119 | 8093522 | - | CH08.730 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.73 | 77,197.32 Da | 54.08 | 69.51 | -0.61 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF81383 | F-box domain | 17 | 61 | 1.7E-9 | IPR036047 |
| SUPERFAMILY | SSF52047 | RNI-like | 165 | 343 | 2.62E-11 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 145 | 354 | 1.3E-8 | IPR032675 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 425 | 439 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 451 | 470 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 501 | 529 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 409 | 424 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 404 | 548 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G50270.2 | - | 8.19E-7 |
| RefSeq | XP_039807060.1 | uncharacterized protein LOC120670930 [Panicum virgatum] | 1.52E-222 |
| TrEMBL | A0A8T0T691 | F-box domain-containing protein OS=Panicum virgatum OX=38727 GN=PVAP13_4NG046076 PE=4 SV=1 | 4.81E-223 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology