Basic Information
Locus ID:
CH08.603
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| CH08 | 6504082 | 6508928 | + | CH08.603 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 10.16 | 76,369.34 Da | 49.95 | 72.83 | -0.47 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF01158 | Ribosomal protein L36e | 269 | 360 | 1.2E-32 | IPR000509 |
| SUPERFAMILY | SSF81383 | F-box domain | 398 | 446 | 8.11E-7 | IPR036047 |
| Gene3D | G3DSA:1.10.10.1760 | 60S ribosomal protein L36 | 261 | 363 | 1.1E-33 | IPR038097 |
| ProSitePatterns | PS01190 | Ribosomal protein L36e signature. | 316 | 326 | - | IPR000509 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 59 | 114 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 33 | 162 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 183 | 213 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Cellular Component:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G37600.1 | Ribosomal protein L36e family protein. | 3.26E-33 |
| RefSeq | XP_003557159.1 | uncharacterized protein LOC100838933 [Brachypodium distachyon] | 2.02E-61 |
| O80929 | Large ribosomal subunit protein eL36z OS=Arabidopsis thaliana OX=3702 GN=RPL36A PE=3 SV=1 | 3.14E-32 | |
| TrEMBL | A0A835FEX9 | 60S ribosomal protein L36 OS=Digitaria exilis OX=1010633 GN=HU200_012780 PE=3 SV=1 | 2.57E-216 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology