Basic Information
Locus ID:
CH08.497
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
ADP binding
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| CH08 | 5283266 | 5291867 | + | CH08.497 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.27 | 145,080.97 Da | 46.78 | 92.97 | -0.28 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00009 | AAA | 377 | 494 | 0.00351088 | - |
| Pfam | PF00931 | NB-ARC domain | 380 | 421 | 1.0E-5 | IPR002182 |
| Pfam | PF00069 | Protein kinase domain | 23 | 301 | 3.4E-47 | IPR000719 |
| Pfam | PF00931 | NB-ARC domain | 443 | 600 | 3.6E-19 | IPR002182 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 10 | 303 | 6.74E-64 | IPR011009 |
| SUPERFAMILY | SSF52047 | RNI-like | 901 | 1083 | 4.32E-6 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 721 | 1164 | 2.55E-23 | - |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 362 | 614 | 3.08E-47 | IPR027417 |
| Gene3D | G3DSA:1.10.10.10 | - | 595 | 694 | 2.2E-9 | IPR036388 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 1088 | 1185 | 1.4E-10 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 1 | 93 | 1.0E-23 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 113 | 308 | 2.5E-45 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 712 | 1087 | 2.6E-31 | IPR032675 |
| Gene3D | G3DSA:3.40.50.300 | - | 365 | 427 | 7.8E-11 | IPR027417 |
| Gene3D | G3DSA:3.40.50.300 | - | 428 | 505 | 4.2E-7 | IPR027417 |
| SMART | SM00220 | serkin_6 | 21 | 301 | 1.2E-22 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 21 | 308 | 35.69331 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 156 | 168 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 27 | 49 | - | IPR017441 |
| PRINTS | PR00364 | Disease resistance protein signature | 547 | 561 | 6.7E-9 | - |
| PRINTS | PR00364 | Disease resistance protein signature | 400 | 415 | 6.7E-9 | - |
| PRINTS | PR00364 | Disease resistance protein signature | 805 | 821 | 6.7E-9 | - |
| Coils | Coil | Coil | 908 | 928 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G38830.1 | cysteine-rich RLK (RECEPTOR-like protein kinase) 26. Encodes a cysteine-rich receptor-like protein kinase. | 9.55E-50 |
| RefSeq | XP_039776658.1 | disease resistance protein RGA2-like isoform X6 [Panicum virgatum] | 0 |
| Q7XA42 | Putative disease resistance protein RGA1 OS=Solanum bulbocastanum OX=147425 GN=RGA1 PE=2 SV=2 | 2.2E-57 | |
| TrEMBL | A0A8T0P7R9 | Protein kinase domain-containing protein (Fragment) OS=Panicum virgatum OX=38727 GN=PVAP13_8NG221700 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology